RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 CUTAO60888 179 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 C8AP07357 584 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 HNRNPA1P09651 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 PLA2G4BP0C869 781 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 HARSP12081 509 aaKnown RBP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 LAMP2P13473 410 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 PROZP22891 400 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 CLCN5P51795 746 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 RAB33AQ14088 237 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 CAVIN1Q6NZI2 390 aaKnown RBP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 CD300LGQ6UXG3 332 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 KRI1Q8N9T8 703 aaKnown RBP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 ATOH1Q92858 354 aaPredicted RBP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 NXPE3Q969Y0 559 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 DDX27Q96GQ7 796 aaKnown RBP23.76■■□□□ 1.39
CBWD1-223ENST00000613988 KCND2Q9NZV8 630 aa23.76■■□□□ 1.39
CBWD1-223ENST00000613988 NARSO43776 548 aaKnown RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 FSHRP23945 695 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 SLC12A3P55017 1021 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 SOX4Q06945 474 aaPredicted RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 AXDND1Q5T1B0 1012 aaPredicted RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 GRASPQ7Z6J2 395 aaPredicted RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 SLC44A3Q8N4M1 653 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 ZBTB45Q96K62 511 aaPredicted RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 SNX27Q96L92 541 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 ZMAT2Q96NC0 199 aaKnown RBP23.75■■□□□ 1.39
CBWD1-223ENST00000613988 MTRRQ9UBK8 725 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 CDY1Q9Y6F8 540 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 MYH11P35749 1972 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 CACNA1HO95180 2353 aa23.75■■□□□ 1.39
CBWD1-223ENST00000613988 DOCK8Q8NF50 2099 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 H0Y858 1186 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 I3L4J1 428 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 ABLIM1O14639 778 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 TOM1L1O75674 476 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 CMA1P23946 247 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 TKTP29401 623 aaKnown RBP23.74■■□□□ 1.39
CBWD1-223ENST00000613988 BRCC3P46736 316 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 ANKS3Q6ZW76 656 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 C3orf58Q8NDZ4 430 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 TMEM161BQ8NDZ6 487 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 AK8Q96MA6 479 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 FAM86C1Q9NVL1 165 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 ANKFY1Q9P2R3 1169 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 POLIQ9UNA4 740 aa23.74■■□□□ 1.39
CBWD1-223ENST00000613988 SRPRBQ9Y5M8 271 aaKnown RBP23.74■■□□□ 1.39
CBWD1-223ENST00000613988 USP34Q70CQ2 3546 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 PODXLO00592 558 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 CCL16O15467 120 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 XYLBO75191 536 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 CFHP08603 1231 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 MAPTP10636 758 aaKnown RBP23.73■■□□□ 1.39
CBWD1-223ENST00000613988 KCNE1P15382 129 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 MARCKSP29966 332 aaPredicted RBP23.73■■□□□ 1.39
CBWD1-223ENST00000613988 HOXA9P31269 272 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 UVSSAQ2YD98 709 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 TMEM119Q4V9L6 283 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 CCDC183Q5T5S1 534 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 CCDC73Q6ZRK6 1079 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 SIX5Q8N196 739 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 SLC7A14Q8TBB6 771 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 BACE2Q9Y5Z0 518 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 DOCK6Q96HP0 2047 aa23.73■■□□□ 1.39
CBWD1-223ENST00000613988 CITO14578 2027 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 NPHP3-ACAD11A0A0J9YXS1 232 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 LETM1O95202 739 aaPredicted RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 NPR3P17342 541 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 UBA7P41226 1012 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 NTHL1P78549 312 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 CACNB1Q02641 598 aaPredicted RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 NOLC1Q14978 699 aaKnown RBP eCLIP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 RSPO2Q6UXX9 243 aaPredicted RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 CALML4Q96GE6 196 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 TMEM63CQ9P1W3 806 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 CNTN3Q9P232 1028 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 LARSQ9P2J5 1176 aaKnown RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 WNT16Q9UBV4 365 aa23.72■■□□□ 1.39
CBWD1-223ENST00000613988 FBXO2Q9UK22 296 aaPredicted RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 ZFP37Q9Y6Q3 630 aaPredicted RBP23.72■■□□□ 1.39
CBWD1-223ENST00000613988 CLDN3O15551 220 aa23.71■■□□□ 1.39
CBWD1-223ENST00000613988 SLC26A4O43511 780 aa23.71■■□□□ 1.39
CBWD1-223ENST00000613988 RPL9P32969 192 aaKnown RBP23.71■■□□□ 1.39
CBWD1-223ENST00000613988 ARSHQ5FYA8 562 aa23.71■■□□□ 1.39
CBWD1-223ENST00000613988 CWF19L1Q69YN2 538 aaKnown RBP23.71■■□□□ 1.39
CBWD1-223ENST00000613988 ZPBP2Q6X784 338 aa23.71■■□□□ 1.39
CBWD1-223ENST00000613988 FSIP1Q8NA03 581 aa23.71■■□□□ 1.39
CBWD1-223ENST00000613988 C18orf25Q96B23 403 aaPredicted RBP23.71■■□□□ 1.39
CBWD1-223ENST00000613988 GZF1Q9H116 711 aaPredicted RBP23.71■■□□□ 1.39
CBWD1-223ENST00000613988 FAM237AA0A1B0GTK4 181 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 H0YCG3 227 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 STK25O00506 426 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 SRFP11831 508 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 AOC1P19801 751 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 MATR3P43243 847 aaKnown RBP eCLIP23.7■■□□□ 1.38
CBWD1-223ENST00000613988 FAM160A1Q05DH4 1040 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 SEZ6Q53EL9 994 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 ST13P5Q8NFI4 369 aaPredicted RBP23.7■■□□□ 1.38
CBWD1-223ENST00000613988 NUB1Q9Y5A7 615 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 MYO15AQ9UKN7 3530 aa23.7■■□□□ 1.38
CBWD1-223ENST00000613988 ANHXE9PGG2 379 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms