RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 PPIDQ08752 370 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 BNIP2Q12982 314 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TRIP13Q15645 432 aaPredicted RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RD3Q7Z3Z2 195 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF555Q8NEP9 628 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RMDN1Q96DB5 314 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 VPS39Q96JC1 886 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 H0YIN7 160 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TTC38Q5R3I4 469 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 XPO7Q9UIA9 1087 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RRN3P2A6NIE6 340 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C4BPBP20851 252 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RGL4Q8IZJ4 473 aa11.37□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCR4P51679 360 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TFAMQ00059 246 aaKnown RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TSNQ15631 228 aaKnown RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SNCBQ16143 134 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSDL1Q3SXM5 330 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DAB2IPQ5VWQ8 1189 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IL31Q6EBC2 164 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPP1R14BQ96C90 147 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM129AQ9BZQ8 928 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM25AB3EWG3 89 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM25CB3EWG5 89 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM25GB3EWG6 89 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TOM1O60784 492 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ATP5F1P24539 256 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DMTNQ08495 405 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NME3Q13232 169 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CALCRLQ16602 461 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RABL6Q3YEC7 729 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 BBS7Q8IWZ6 715 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FOPNLQ96NB1 174 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCDC3Q9BQI4 270 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZWILCHQ9H900 591 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FESP07332 822 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IGFBP4P22692 258 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FSHRP23945 695 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AKR1D1P51857 326 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 APBA1Q02410 837 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AP1B1Q10567 949 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ABRAXAS1Q6UWZ7 409 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IFNEQ86WN2 208 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 URGCPQ8TCY9 931 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SPATA16Q9BXB7 569 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IL1RAPL1Q9NZN1 696 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DFFAO00273 331 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SERPINB10P48595 397 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PRIM2P49643 509 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IL2P60568 153 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZSCAN26Q16670 478 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GALNT18Q6P9A2 607 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RFT1Q96AA3 541 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MIS12Q9H081 205 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HIF3AQ9Y2N7 669 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 METP08581 1390 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PDX1P52945 283 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CACNB3P54284 484 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KLHL30Q0D2K2 578 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PSMD5Q16401 504 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SP110Q9HB58 689 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZFATQ9P243 1243 aa11.36□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GAS7O60861 476 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GABBR2O75899 941 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GHRP10912 638 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RGS7P49802 495 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PSME3P61289 254 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CYP4F11Q9HBI6 524 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IL2RBP14784 551 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FBXO38Q6PIJ6 1188 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 BRINP3Q76B58 766 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FBXO10Q9UK96 956 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TLR2O60603 784 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KCNJ6P48051 423 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms