RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 DRC7Q8IY82 874 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 URGCPQ8TCY9 931 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 VWCEQ96DN2 955 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 CXCL16Q9H2A7 254 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
PRKN-210ENST00000612540 GCNT4Q9P109 453 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
PRKN-210ENST00000612540 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
PRKN-210ENST00000612540 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 SMIM28A0A1B0GU29 152 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 ARL5CA6NH57 179 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 FGBP02675 491 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 KRT19P08727 400 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 GUCY2FP51841 1108 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 FAM189BP81408 668 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 NR1I3Q14994 352 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKN-210ENST00000612540 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 NT5DC4Q86YG4 428 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 ZNF516Q92618 1163 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 ZMAT2Q96NC0 199 aaKnown RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 ELAC1Q9H777 363 aaKnown RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKN-210ENST00000612540 UBQLN1Q9UMX0 589 aaKnown RBP13.85□□□□□ -0.19
PRKN-210ENST00000612540 DERAQ9Y315 318 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 C2CD2Q9Y426 696 aa13.85□□□□□ -0.19
PRKN-210ENST00000612540 FNDC1Q4ZHG4 1894 aaPredicted RBP13.84□□□□□ -0.19
PRKN-210ENST00000612540 PTGESO14684 152 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 P4HA2O15460 535 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 HOXA2O43364 376 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 BAIAP3O94812 1187 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 POMCP01189 267 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 HLA-DRAP01903 254 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 THP07101 528 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 KCNE1P15382 129 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 DNAJB2P25686 324 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 GATMP50440 423 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
PRKN-210ENST00000612540 CLDN10P78369 228 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TRPC3Q13507 836 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 EXOC3L4Q17RC7 722 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 ZACNQ401N2 412 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 CLLU1OSQ5K130 101 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 ALKAL1Q6UXT8 129 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TMC6Q7Z403 805 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 FBXL13Q8NEE6 735 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 C18orf25Q96B23 403 aaPredicted RBP13.84□□□□□ -0.19
PRKN-210ENST00000612540 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
PRKN-210ENST00000612540 SLC38A7Q9NVC3 462 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 DPP3Q9NY33 737 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 TUBGCP4Q9UGJ1 667 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 SCN1AP35498 2009 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 PTPRSQ13332 1948 aa13.84□□□□□ -0.19
PRKN-210ENST00000612540 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 OFD1O75665 1012 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 ITGB3P05106 788 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 FOSL2P15408 326 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 POLR2BP30876 1174 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 KLK7P49862 253 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 DEFB103AP81534 67 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 RNASELQ05823 741 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 LRMPQ12912 555 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 GRIK3Q13003 919 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 NCOA4Q13772 614 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 EPC2Q52LR7 807 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 XKR4Q5GH76 650 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 NOMO2Q5JPE7 1267 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 TMEM130Q8N3G9 435 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 CCDC150Q8NCX0 1101 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 NEK11Q8NG66 645 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.2
PRKN-210ENST00000612540 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
PRKN-210ENST00000612540 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms