RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CYP1A2P05177 515 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 ELF1P32519 619 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 ERFP50548 548 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 GTF2BQ00403 316 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 SLC27A3Q5K4L6 730 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 SPATA21Q7Z572 469 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 RBM15Q96T37 977 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 HERC5Q9UII4 1024 aaKnown RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 CNOT7Q9UIV1 285 aaKnown RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 MROH7Q68CQ1 1323 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 ASAP2O43150 1006 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 PEX10O60683 326 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 DSG3P32926 999 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 RPL7AP62424 266 aaKnown RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 NOP14P78316 857 aaKnown RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 NFIL3Q16649 462 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 MCOLN2Q8IZK6 566 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 NSMCE1Q8WV22 266 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 UMODL1Q5DID0 1318 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 BAATQ14032 418 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 CLEC16AQ2KHT3 1053 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 PREPLQ4J6C6 727 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 LACTB2Q53H82 288 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 DDX1Q92499 740 aaKnown RBP14.95□□□□□ -0.02
COL6A1-207ENST00000612273 PITPNM3Q9BZ71 974 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 DCLK3Q9C098 648 aa14.95□□□□□ -0.02
COL6A1-207ENST00000612273 ZNF536O15090 1300 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 UBE4BO95155 1302 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 LRRIQ4A6NIV6 560 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 SRRM3A6NNA2 597 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-207ENST00000612273 GRIN3BO60391 1043 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 DIAPH2O60879 1101 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 RFX1P22670 979 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 LIG4P49917 911 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 NCALDP61601 193 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-207ENST00000612273 WDR44Q5JSH3 913 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 C3orf20Q8ND61 904 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 ZNF516Q92618 1163 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 OSBPL8Q9BZF1 889 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 UVRAGQ9P2Y5 699 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL6A1-207ENST00000612273 EXOC1LA0A1B0GW35 172 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
COL6A1-207ENST00000612273 ZNF862O60290 1169 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 PSMC5P62195 406 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 TRAF1Q13077 416 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 B3GNT9Q6UX72 402 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 LRRC19Q9H756 370 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 ETNK1Q9HBU6 452 aa14.94□□□□□ -0.02
COL6A1-207ENST00000612273 H0Y3Z8 333 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 FSCN2O14926 492 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 NLRP11P59045 1033 aaKnown RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 SMTNL2Q2TAL5 461 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 SCARA5Q6ZMJ2 495 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 CLEC4DQ8WXI8 215 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 TCHPQ9BT92 498 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 ANP32DO95626 131 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 HLA-DRAP01903 254 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 ICAM1P05362 532 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 IVDP26440 423 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 FOXN2P32314 431 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 CYP24A1Q07973 514 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 TXNRD3NBQ6F5E7 133 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 TRMT10CQ7L0Y3 403 aaKnown RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 DPH6Q7L8W6 267 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 GEMIN8Q9NWZ8 242 aaKnown RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 KLHL14Q9P2G3 628 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 FEM1BQ9UK73 627 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 DNPEPQ9ULA0 475 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 EXOC7Q9UPT5 735 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 MGRN1O60291 552 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 DNAJC8O75937 253 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 ITIH2P19823 946 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 TARSP26639 723 aaKnown RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 NRLP54845 237 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 GPS1Q13098 491 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 CDR2LQ86X02 465 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-207ENST00000612273 SUPT20HQ8NEM7 779 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 ATL2Q8NHH9 583 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 FAM151AQ8WW52 585 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 FAM167BQ9BTA0 163 aa14.93□□□□□ -0.02
COL6A1-207ENST00000612273 PTPRJQ12913 1337 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 WDR64B1ANS9 1081 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 GGPS1O95749 300 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 NQO1P15559 274 aaKnown RBP14.92□□□□□ -0.02
COL6A1-207ENST00000612273 GSCP56915 257 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-207ENST00000612273 OSTNP61366 133 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms