RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 WDR91A4D1P6 747 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 PDHBP11177 359 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 SFNP31947 248 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 GPC5P78333 572 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 CENPUQ71F23 418 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ARMCX2Q7L311 632 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 TCP11Q8WWU5 503 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 RBM41Q96IZ5 413 aaKnown RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 POLR3FQ9H1D9 316 aaPredicted RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 FRMD3A2A2Y4 597 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 GGCXP38435 758 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 TWF2Q6IBS0 349 aaKnown RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ACAD9Q9H845 621 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 MID2Q9UJV3 735 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 KIDINS220Q9ULH0 1771 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 CES1P23141 567 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 KPNA2P52292 529 aaKnown RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ARF3P61204 181 aaPredicted RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ARF1P84077 181 aaKnown RBP9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 TFDP2Q14188 446 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ZNF699Q32M78 642 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ELP3Q9H9T3 547 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 SPATA31A5Q5VU36 1347 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 SPATA31A7Q8IWB4 1347 aa9.98□□□□□ -0.81
SRGAP2B-204ENST00000612199 ZC3H13Q5T200 1668 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CA4P22748 312 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 NCALDP61601 193 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 STK4Q13043 487 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 SPATA33Q96N06 139 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 STN1Q9H668 368 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 BAATQ14032 418 aaPredicted RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 RCN1Q15293 331 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 SHROOM1Q2M3G4 852 aaPredicted RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 SBK1Q52WX2 424 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 BTBD8Q5XKL5 378 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 ERAP2Q6P179 960 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 HAUS6Q7Z4H7 955 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CLYBLQ8N0X4 340 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 DNAJC1Q96KC8 554 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 DDX50Q9BQ39 737 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 LIMA1Q9UHB6 759 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TUBE1Q9UJT0 475 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 F5H423 210 aaPredicted RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 C2CD2LO14523 706 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 PSMC5P62195 406 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 RBBP7Q16576 425 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 BZW1Q7L1Q6 419 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TXNRD3Q86VQ6 643 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 SCYL3Q8IZE3 742 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CHP1Q99653 195 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 MYLK2Q9H1R3 596 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 DNAJC11Q9NVH1 559 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 ANAPC2Q9UJX6 822 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 EMSYQ7Z589 1322 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 PSMD14O00487 310 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 YWHAQP27348 245 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TAF13Q15543 124 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 HDDC2Q7Z4H3 204 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 APOBEC3FQ8IUX4 373 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 IQCF2Q8IXL9 164 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 STX19Q8N4C7 294 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 RNF25Q96BH1 459 aaPredicted RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 HES6Q96HZ4 224 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 EIF2AQ9BY44 585 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TXLNGQ9NUQ3 528 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TMEM161AQ9NX61 479 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 PCSK1NQ9UHG2 260 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 GRID2IPA4D2P6 1211 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 NCAM1P13591 858 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CAMK1Q14012 370 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 ICA1LQ8NDH6 482 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 BHMTQ93088 406 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 IQCMA0A1B0GVH7 501 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 PFDN1O60925 122 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 YWHAZP63104 245 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TMEM154Q6P9G4 183 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 DEPDC7Q96QD5 511 aa9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 TTC7AQ9ULT0 858 aaPredicted RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
SRGAP2B-204ENST00000612199 E5RI56 91 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 TJP3O95049 919 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 CAV1Q03135 178 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 C16orf86Q6ZW13 317 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 SAMD7Q7Z3H4 446 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 ENTPD7Q9NQZ7 604 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 COQ6Q9Y2Z9 468 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 PCDHA10Q9Y5I2 948 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 MEI4A8MW99 385 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 ZBED1O96006 694 aa9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 FTLP02792 175 aaPredicted RBP9.96□□□□□ -0.81
SRGAP2B-204ENST00000612199 CCDC130P13994 396 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms