RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MREGQ8N565 214 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 FGD4Q96M96 766 aa11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 RTFDC1Q9BY42 306 aaPredicted RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 FAM208AQ9UK61 1670 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-206ENST00000611976 PI4K2BG5E9Z4 385 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 FAM153BP0C7A2 387 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 SERPINB4P48594 390 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 MRPS35P82673 323 aaKnown RBP11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 CRYMQ14894 314 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 FAM153CQ494X1 144 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 HEATR6Q6AI08 1181 aaKnown RBP11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 PIP4K2CQ8TBX8 421 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 OLFML3Q9NRN5 406 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 FAM153AQ9UHL3 310 aa11.52□□□□□ -0.56
CDC42EP3-206ENST00000611976 AKAP3O75969 853 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 CNGA1P29973 690 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 EFNA5P52803 228 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 MYBPC2Q14324 1141 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 ANO5Q75V66 913 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 TSEN2Q8NCE0 465 aaKnown RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 HIPK4Q8NE63 616 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 TTC1Q99614 292 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 AKAP12Q02952 1782 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 NVLO15381 856 aaKnown RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 KLRC4O43908 158 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 CASP4P49662 377 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 HIC1Q14526 733 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 APLFQ8IW19 511 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 DNAJC9Q8WXX5 260 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 TRIM15Q9C019 465 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 BLOC1S4Q9NUP1 217 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 RSPH10B2B2RC85 870 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 PDE2AO00408 941 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 RSPH10BP0C881 870 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 TTMPQ5BVD1 217 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 DHX38Q92620 1227 aaKnown RBP11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 KLHL11Q9NVR0 708 aa11.52□□□□□ -0.57
CDC42EP3-206ENST00000611976 EPHB1P54762 984 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 CDH6P55285 790 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 FAM102AQ5T9C2 384 aaPredicted RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 HAUS8Q9BT25 410 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 SLC13A1Q9BZW2 595 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 JPH1Q9HDC5 661 aaPredicted RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 OSGEPQ9NPF4 335 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 GGA2Q9UJY4 613 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 CREB3O43889 395 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 PHKA2P46019 1235 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 MIIPQ5JXC2 388 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 LMBRD2Q68DH5 695 aaPredicted RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 KLC3Q6P597 504 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 TRIML2Q8N7C3 387 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 PDZD8Q8NEN9 1154 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 ATP8B4Q8TF62 1192 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 VPS11Q9H270 941 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 ANKEF1Q9NU02 776 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 GOLGA8CPA6NN73 597 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 APOL1O14791 398 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 RALAP11233 206 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 HNRNPH3P31942 346 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 ZNF200P98182 395 aaPredicted RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 LVRNQ6Q4G3 990 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 NACA2Q9H009 215 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 G3BP2Q9UN86 482 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 TAC1P20366 129 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 GEMIN4P57678 1058 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 PDE1CQ14123 709 aaPredicted RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 COBLL1Q53SF7 1204 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 CDC42EP4Q9H3Q1 356 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 XPO7Q9UIA9 1087 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 TNS2Q63HR2 1409 aa11.51□□□□□ -0.57
CDC42EP3-206ENST00000611976 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 SERPINB9P50453 376 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 KLHL8Q9P2G9 620 aaPredicted RBP11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 IGSF9BQ9UPX0 1349 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
CDC42EP3-206ENST00000611976 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms