RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 F5H423 210 aaPredicted RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 CSDE1O75534 798 aaKnown RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 GRAP2O75791 330 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 RRM1P23921 792 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 DLG4P78352 724 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 CAV1Q03135 178 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 CYP24A1Q07973 514 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SYCP2LQ5T4T6 812 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 C1orf131Q8NDD1 294 aaKnown RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 OR6J1Q8NGC5 347 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■■■ 70.2
TCF3-220ENST00000611869 ACSF2Q96CM8 615 aaPredicted RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SSX2IPQ9Y2D8 614 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ATP9AO75110 1047 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SNAPC2Q13487 334 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
TCF3-220ENST00000611869 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 GARTP22102 1010 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ORC1Q13415 861 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ATG4AQ8WYN0 398 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SYNPO2Q9UMS6 1093 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 INPP5FQ9Y2H2 1132 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 RALAP11233 206 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 HSD17B3P37058 310 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 NAMPTP43490 491 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 BCAR1P56945 870 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 MYBPC2Q14324 1141 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 SMTNL2Q2TAL5 461 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 CYP4A22Q5TCH4 519 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
TCF3-220ENST00000611869 PJA2O43164 708 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 HBP1O60381 514 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 CIB2O75838 187 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 PTPRAP18433 802 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 RASSF2P50749 326 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 IRX4P78413 519 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 C1orf228Q6PIY5 440 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 KLHL29Q96CT2 875 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 SLIT2O94813 1529 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 ANKRD63C9JTQ0 380 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 GH1P01241 217 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 TBC1D31Q96DN5 1066 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
TCF3-220ENST00000611869 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
TCF3-220ENST00000611869 IRAK1P51617 712 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 SEC24CP53992 1094 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 KIF22Q14807 665 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 TMEM132DQ14C87 1099 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 LONRF1Q17RB8 773 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
TCF3-220ENST00000611869 NIPA1Q7RTP0 329 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 SAMD3Q8N6K7 520 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 PPFIBP2Q8ND30 876 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 DHX35Q9H5Z1 703 aaKnown RBP13.92□□□□□ -0.18
TCF3-220ENST00000611869 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
TCF3-220ENST00000611869 MYCP01106 439 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 PDGFRAP16234 1089 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 MAPK7Q13164 816 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 NAA25Q14CX7 972 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 KYNUQ16719 465 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 P3H1Q32P28 736 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 METTL23Q86XA0 190 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 TMC2Q8TDI7 906 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 PARD3BQ8TEW8 1205 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 SPATC1LQ9H0A9 340 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 GANQ9H2C0 597 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 FAM49BQ9NUQ9 324 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 PABPN1LA6NDY0 278 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 OGTO15294 1046 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 PHLPP1O60346 1717 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 GZMAP12544 262 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 SLC29A2Q14542 456 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 SMAD1Q15797 465 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 LY6KQ17RY6 165 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 HYIQ5T013 277 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ACTRT1Q8TDG2 376 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 RSRC1Q96IZ7 334 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 PITPNM3Q9BZ71 974 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 CCL15-CCL14A0A0B4J2E2 113 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 NLRP11P59045 1033 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 RNASELQ05823 741 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 CCL15Q16663 113 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms