RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 WNT16Q9UBV4 365 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 CDH7Q9ULB5 785 aa17.5■□□□□ 0.39
SGMS1-209ENST00000609445 MYO15AQ9UKN7 3530 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 FAM186AA6NE01 2351 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 GFRA3O60609 400 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 MCM2P49736 904 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 ROR1Q01973 937 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 DHX8Q14562 1220 aaKnown RBP17.49■□□□□ 0.39
SGMS1-209ENST00000609445 GPBP1Q86WP2 473 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 KCTD17Q8N5Z5 321 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 ING5Q8WYH8 240 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 FGF13Q92913 245 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
SGMS1-209ENST00000609445 COL4A3Q01955 1670 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 WDR27A2RRH5 827 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 CXCL8P10145 99 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 MATR3P43243 847 aaKnown RBP eCLIP17.48■□□□□ 0.395e-7■■■□□ 16.3
SGMS1-209ENST00000609445 NCKAP1LP55160 1127 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 ARPP19P56211 112 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 SPAG1Q07617 926 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 MCL1Q07820 350 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 UVSSAQ2YD98 709 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 PABPC1LQ4VXU2 614 aaKnown RBP17.48■□□□□ 0.39
SGMS1-209ENST00000609445 ZPBP2Q6X784 338 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 CCDC105Q8IYK2 499 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 BICD1Q96G01 975 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 RTP3Q9BQQ7 232 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 TBC1D17Q9HA65 648 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 BLOC1S4Q9NUP1 217 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 KCND2Q9NZV8 630 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-209ENST00000609445 NUB1Q9Y5A7 615 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 ZFP37Q9Y6Q3 630 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-209ENST00000609445 DMDP11532 3685 aa17.48■□□□□ 0.39
SGMS1-209ENST00000609445 CLDN3O15551 220 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 POU2F2P09086 479 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 PLCG1P19174 1290 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 RFX1P22670 979 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 MCM4P33991 863 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 TNFSF9P41273 254 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 MCM6Q14566 821 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 SLC8B1Q6J4K2 584 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 DTWD2Q8NBA8 298 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 CALML4Q96GE6 196 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 SUSD3Q96L08 255 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 AK8Q96MA6 479 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 LARSQ9P2J5 1176 aaKnown RBP17.47■□□□□ 0.39
SGMS1-209ENST00000609445 FBXL5Q9UKA1 691 aa17.47■□□□□ 0.39
SGMS1-209ENST00000609445 SYN3O14994 580 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ABLIM3O94929 683 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 SEC24AO95486 1093 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 RPL9P32969 192 aaKnown RBP17.46■□□□□ 0.39
SGMS1-209ENST00000609445 UBA7P41226 1012 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 GPC5P78333 572 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 MRPL58Q14197 206 aaKnown RBP17.46■□□□□ 0.39
SGMS1-209ENST00000609445 KARSQ15046 597 aaKnown RBP17.46■□□□□ 0.39
SGMS1-209ENST00000609445 SF3A1Q15459 793 aaKnown RBP17.46■□□□□ 0.39
SGMS1-209ENST00000609445 SLC5A9Q2M3M2 681 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ZBTB41Q5SVQ8 909 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 POTEHQ6S545 545 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ASCL5Q7RTU5 278 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 FRMD5Q7Z6J6 570 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 NPAS3Q8IXF0 933 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 KXD1Q9BQD3 176 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ARHGEF3Q9NR81 526 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 SLC2A4RGQ9NR83 387 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 VPS13AQ96RL7 3174 aa17.46■□□□□ 0.39
SGMS1-209ENST00000609445 ANK1P16157 1881 aa17.46■□□□□ 0.38
SGMS1-209ENST00000609445 SPTBN4Q9H254 2564 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 PROB1E7EW31 1015 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 H7C4K7 107 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 K7ENM7 598 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 PRRG1O14668 218 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 FAM13AO94988 1023 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 CLTAP09496 248 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 NBL1P41271 181 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 LIG4P49917 911 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 GUCY2FP51841 1108 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 ANGPT1Q15389 498 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 MYCT1Q8N699 235 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 RAD54LQ92698 747 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 DDX12PQ92771 950 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 KIF12Q96FN5 646 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 CYP4F11Q9HBI6 524 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 TBX20Q9UMR3 447 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 MRPS23Q9Y3D9 190 aaKnown RBP17.45■□□□□ 0.38
SGMS1-209ENST00000609445 WDR87Q6ZQQ6 2873 aa17.45■□□□□ 0.38
SGMS1-209ENST00000609445 CACNA1IQ9P0X4 2223 aa17.44■□□□□ 0.38
SGMS1-209ENST00000609445 TTC26A0AVF1 554 aa17.44■□□□□ 0.38
SGMS1-209ENST00000609445 ARHGEF37A1IGU5 675 aa17.44■□□□□ 0.38
SGMS1-209ENST00000609445 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
SGMS1-209ENST00000609445 LACTBL1A8MY62 500 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms