RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CDK17Q00537 523 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 NFIBO00712 420 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 ASMTLO95671 621 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 AGTP01019 485 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 YWHABP31946 246 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 ZC3H4Q9UPT8 1303 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 CAND2O75155 1236 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 SFNP31947 248 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 CMTM5Q96DZ9 223 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 USP10Q14694 798 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 TRPC7Q9HCX4 862 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 UTYO14607 1347 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 SERPINB4P48594 390 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 PCYOX1LQ8NBM8 494 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 ZBTB39O15060 712 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 RGS7P49802 495 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 DIS3LQ8TF46 1054 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 A0A1W2PQC6 194 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 CPB1P15086 417 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 RIN2Q8WYP3 895 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 PKP3Q9Y446 797 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 C21orf2O43822 256 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 NDUFS3O75489 264 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 LSP1P33241 339 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 CLK1P49759 484 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 MCEEQ96PE7 176 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
USP6NL-205ENST00000609104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 12.1
USP6NL-205ENST00000609104 PAIP2BQ9ULR5 123 aaKnown RBP13.73□□□□□ -0.21
USP6NL-205ENST00000609104 SUPT3HB4E1H0 165 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 TRIM66O15016 1216 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 TTC39BQ5VTQ0 682 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 GUF1Q8N442 669 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ARAP3Q8WWN8 1544 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 HES6Q96HZ4 224 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■□□ 19.2
USP6NL-205ENST00000609104 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ARHGEF38Q9NXL2 777 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 GYS1P13807 737 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 VPS50Q96JG6 964 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 H0YC42 278 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 CENPAP49450 140 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 WASHC5Q12768 1159 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 SYTL3Q4VX76 610 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 CCT7Q99832 543 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 GRM4Q14833 912 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 PSMD3O43242 534 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 SCN3BQ9NY72 215 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 PSMC3IPQ9P2W1 217 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ZBTB22O15209 634 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-205ENST00000609104 SGO1Q5FBB7 561 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 KLHL2O95198 593 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 ACOT2P49753 483 aa13.72□□□□□ -0.21
USP6NL-205ENST00000609104 PTK7Q13308 1070 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 DPF2Q92785 391 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 RGL1Q9NZL6 768 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 CD274Q9NZQ7 290 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SMAD5Q99717 465 aaKnown RBP13.71□□□□□ -0.21
USP6NL-205ENST00000609104 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SENP7Q9BQF6 1050 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SERPINB3P29508 390 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 BTKQ06187 659 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 C11orf74Q86VG3 221 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms