RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 UROC1Q96N76 676 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 ACCSQ96QU6 501 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 POP1Q99575 1024 aaKnown RBP15.77■□□□□ 0.12
HDDC2-204ENST00000608295 PHF7Q9BWX1 381 aaPredicted RBP15.77■□□□□ 0.12
HDDC2-204ENST00000608295 TRIM9Q9C026 710 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 PCIF1Q9H4Z3 704 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 SEL1LQ9UBV2 794 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 STK39Q9UEW8 545 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 PRKAG3Q9UGI9 489 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 SERTAD1Q9UHV2 236 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 SSX2IPQ9Y2D8 614 aa15.77■□□□□ 0.12
HDDC2-204ENST00000608295 TSC2P49815 1807 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PPEF2O14830 753 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PPP1R37O75864 691 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
HDDC2-204ENST00000608295 KCNE1P15382 129 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PFKFB1P16118 471 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 HOXB8P17481 243 aaPredicted RBP15.76■□□□□ 0.11
HDDC2-204ENST00000608295 DCLRE1AQ6PJP8 1040 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
HDDC2-204ENST00000608295 RNF135Q8IUD6 432 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 ADAM7Q9H2U9 754 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 AGO2Q9UKV8 859 aaKnown RBP15.76■□□□□ 0.11
HDDC2-204ENST00000608295 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
HDDC2-204ENST00000608295 DOCK6Q96HP0 2047 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 TTC26A0AVF1 554 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 FRMD3A2A2Y4 597 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 TMEM189-UBE2V1I3L0A0 370 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 OR1D2P34982 312 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CDR1P51861 262 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 ELAVL2Q12926 359 aaKnown RBP15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CUL4BQ13620 913 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 NELFCDQ8IXH7 590 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 LNX1Q8TBB1 728 aaPredicted RBP15.75■□□□□ 0.11
HDDC2-204ENST00000608295 RIPOR3Q96MK2 946 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CLSTN3Q9BQT9 956 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 FAM213AQ9BRX8 229 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 RXFP1Q9HBX9 757 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 OLFML3Q9NRN5 406 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 KBTBD4Q9NVX7 518 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CPSF3Q9UKF6 684 aaKnown RBP15.75■□□□□ 0.11
HDDC2-204ENST00000608295 RCOR1Q9UKL0 485 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 EXOC7Q9UPT5 735 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 TIMM13Q9Y5L4 95 aaPredicted RBP15.75■□□□□ 0.11
HDDC2-204ENST00000608295 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
HDDC2-204ENST00000608295 SCN1AP35498 2009 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 CCDC195A0A1B0GUA6 201 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 C19orf67A6NJJ6 358 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 C2CD4DB7Z1M9 353 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 FGFR3P22607 806 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 ADSSP30520 456 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 WNT7BP56706 349 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 ITIH3Q06033 890 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 ARMCX5Q6P1M9 558 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 RSPO2Q6UXX9 243 aaPredicted RBP15.74■□□□□ 0.11
HDDC2-204ENST00000608295 KREMEN2Q8NCW0 462 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 SMG7Q92540 1137 aaKnown RBP15.74■□□□□ 0.11
HDDC2-204ENST00000608295 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.74■□□□□ 0.112e-7■■□□□ 11.9
HDDC2-204ENST00000608295 RAPGEFL1Q9UHV5 662 aa15.74■□□□□ 0.11
HDDC2-204ENST00000608295 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
HDDC2-204ENST00000608295 LOC730098B7Z3J9 87 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 TRAPPC3O43617 180 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 MTHFRP42898 656 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 AMPD3Q01432 767 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 CREMQ03060 361 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 TMEM132DQ14C87 1099 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 VARS2Q5ST30 1063 aaKnown RBP15.73■□□□□ 0.11
HDDC2-204ENST00000608295 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
HDDC2-204ENST00000608295 EFCAB13Q8IY85 973 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 TDRD5Q8NAT2 981 aaKnown RBP15.73■□□□□ 0.11
HDDC2-204ENST00000608295 ST13P5Q8NFI4 369 aaPredicted RBP15.73■□□□□ 0.11
HDDC2-204ENST00000608295 STRA6Q9BX79 667 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 PIDD1Q9HB75 910 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 FNIP2Q9P278 1114 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 MTRRQ9UBK8 725 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 POLIQ9UNA4 740 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
HDDC2-204ENST00000608295 CCL16O15467 120 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 DCXO43602 365 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 ACTN4O43707 911 aaKnown RBP15.72■□□□□ 0.11
HDDC2-204ENST00000608295 C8AP07357 584 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 SCP2P22307 547 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 ABCD1P33897 745 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 KYAT1Q16773 422 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 LIN9Q5TKA1 542 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 CRELD2Q6UXH1 353 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-204ENST00000608295 DSTYKQ6XUX3 929 aa15.72■□□□□ 0.11
HDDC2-204ENST00000608295 CCDC149Q6ZUS6 474 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms