RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 PTK2Q05397 1052 aa23.58■■□□□ 1.37
USF2-216ENST00000607959 ZNF571Q7Z3V5 609 aaPredicted RBP23.58■■□□□ 1.37
USF2-216ENST00000607959 SYT11Q9BT88 431 aa23.58■■□□□ 1.37
USF2-216ENST00000607959 CAND2O75155 1236 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 PHACTR2O75167 634 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 CD4P01730 458 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 KIF11P52732 1056 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 GCNT1Q02742 428 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 KLHL30Q0D2K2 578 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 APBB1IPQ7Z5R6 666 aaPredicted RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 ANKRD36BP1Q96IX9 119 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 TRIM6Q9C030 488 aaPredicted RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 RNF19AQ9NV58 838 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 EIF3CLB5ME19 914 aaKnown RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 LCA5LO95447 670 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 ABL1P00519 1130 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 DSC3Q14574 896 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 ZBTB6Q15916 424 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 TDRD12Q587J7 1177 aaKnown RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 TWF2Q6IBS0 349 aaKnown RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 FAM71AQ8IYT1 594 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 U2AF1L4Q8WU68 220 aaKnown RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 CCDC42Q96M95 316 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 EIF3CQ99613 913 aaKnown RBP23.57■■□□□ 1.36
USF2-216ENST00000607959 APOL6Q9BWW8 343 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 PLEKHA5Q9HAU0 1116 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 C2CD2Q9Y426 696 aa23.57■■□□□ 1.36
USF2-216ENST00000607959 SGPL1O95470 568 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 NOP14P78316 857 aaKnown RBP23.56■■□□□ 1.36
USF2-216ENST00000607959 CYP27A1Q02318 531 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 TMEM132DQ14C87 1099 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 NYAP1Q6ZVC0 841 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 CHST12Q9NRB3 414 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 TFR2Q9UP52 801 aa23.56■■□□□ 1.36
USF2-216ENST00000607959 MEIS3P2A8K0S8 358 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 GPR182O15218 404 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 TNNC2P02585 160 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 CCDC175P0C221 793 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 FERP16591 822 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 MFAP3P55082 362 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 XKR4Q5GH76 650 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 C1orf112Q9NSG2 853 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 CNTN3Q9P232 1028 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 PCDHB2Q9Y5E7 798 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 RCCD1A6NED2 376 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 HSPA1AP0DMV8 641 aaKnown RBP23.55■■□□□ 1.36
USF2-216ENST00000607959 HSPA1BP0DMV9 641 aaKnown RBP23.55■■□□□ 1.36
USF2-216ENST00000607959 ACO1P21399 889 aaKnown RBP23.55■■□□□ 1.36
USF2-216ENST00000607959 CLCN1P35523 988 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 CYLC1P35663 651 aaPredicted RBP23.55■■□□□ 1.36
USF2-216ENST00000607959 GFPT1Q06210 699 aaPredicted RBP23.55■■□□□ 1.36
USF2-216ENST00000607959 WDR44Q5JSH3 913 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 CD302Q8IX05 232 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 SEZ6LQ9BYH1 1024 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 ACP6Q9NPH0 428 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 KLK14Q9P0G3 267 aa23.55■■□□□ 1.36
USF2-216ENST00000607959 ARHGAP25P42331 645 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 PAK2Q13177 524 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 UBR7Q8N806 425 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 DIS3LQ8TF46 1054 aaKnown RBP23.54■■□□□ 1.36
USF2-216ENST00000607959 KIF12Q96FN5 646 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 FAM105AQ9NUU6 356 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 SQORQ9Y6N5 450 aa23.54■■□□□ 1.36
USF2-216ENST00000607959 A0A087X0T9 212 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 ZSCAN12O43309 604 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 ITGB3P05106 788 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 FAM228BP0C875 321 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 CUL2Q13617 745 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 GPNMBQ14956 572 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 GLRA4Q5JXX5 417 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 NENFQ9UMX5 172 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 YARSP54577 528 aaKnown RBP23.53■■□□□ 1.36
USF2-216ENST00000607959 SGSM1Q2NKQ1 1148 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 NT5DC4Q86YG4 428 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 C18orf25Q96B23 403 aaPredicted RBP23.53■■□□□ 1.36
USF2-216ENST00000607959 C16orf45Q96MC5 204 aaPredicted RBP23.53■■□□□ 1.36
USF2-216ENST00000607959 DPP3Q9NY33 737 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 TUBGCP4Q9UGJ1 667 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 ADAMTS1Q9UHI8 967 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 DERAQ9Y315 318 aa23.53■■□□□ 1.36
USF2-216ENST00000607959 BZW2Q9Y6E2 419 aaKnown RBP23.53■■□□□ 1.36
USF2-216ENST00000607959 KIAA0100Q14667 2235 aaKnown RBP23.52■■□□□ 1.36
USF2-216ENST00000607959 CYP26A1O43174 497 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 AKR1B10O60218 316 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
USF2-216ENST00000607959 COL6A1P12109 1028 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 ATN1P54259 1190 aaPredicted RBP23.52■■□□□ 1.36
USF2-216ENST00000607959 TRPC3Q13507 836 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 ENOSF1Q7L5Y1 443 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 LNX1Q8TBB1 728 aaPredicted RBP23.52■■□□□ 1.36
USF2-216ENST00000607959 SLC20A1Q8WUM9 679 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 PARP2Q9UGN5 583 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 SCN1AP35498 2009 aa23.52■■□□□ 1.36
USF2-216ENST00000607959 SMIM28A0A1B0GU29 152 aa23.51■■□□□ 1.35
USF2-216ENST00000607959 DDX3XO00571 662 aaKnown RBP eCLIP23.51■■□□□ 1.35
USF2-216ENST00000607959 CALCAP01258 141 aa23.51■■□□□ 1.35
USF2-216ENST00000607959 CTCFP49711 727 aaPredicted RBP23.51■■□□□ 1.35
USF2-216ENST00000607959 SLC39A5Q6ZMH5 540 aa23.51■■□□□ 1.35
USF2-216ENST00000607959 SLC30A5Q8TAD4 765 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms