RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 TDRD15B5MCY1 1934 aaKnown RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 ARHGEF37A1IGU5 675 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 ARHGEF35A5YM69 484 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 CASTOR2A6NHX0 329 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 PRRG1O14668 218 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 CCL16O15467 120 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 RECQL4O94761 1208 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 PRKCBP05771 671 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 RHOP08100 348 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 PAX3P23760 479 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 RPL9P32969 192 aaKnown RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 PLD1Q13393 1074 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 SLC8B1Q6J4K2 584 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 PRSS55Q6UWB4 352 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 PDZD4Q76G19 769 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 MAML2Q8IZL2 1156 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 APPL2Q8NEU8 664 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 ITFG1Q8TB96 612 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 FAM200AQ8TCP9 573 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 B3GALT6Q96L58 329 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 POLR3CQ9BUI4 534 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 TRMT61BQ9BVS5 477 aaKnown RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 RAB34Q9BZG1 259 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 C8orf33Q9H7E9 229 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 ORC3Q9UBD5 711 aaPredicted RBP6.92□□□□□ -1.3
CUX1-220ENST00000607092 NUB1Q9Y5A7 615 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 CDY1Q9Y6F8 540 aa6.92□□□□□ -1.3
CUX1-220ENST00000607092 MIA3Q5JRA6 1907 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 IGF2RP11717 2491 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 POTEMA6NI47 508 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 K7ERI5 159 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PTGESO14684 152 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 B4GALT5O43286 388 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PFKFB2O60825 505 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 FGF19O95750 216 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 MYBP10242 640 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 ATF2P15336 505 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PSMC3P17980 439 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 CYP11B2P19099 503 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 TXKP42681 527 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 CXCL12P48061 93 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 ATXN1P54253 815 aaKnown RBP6.91□□□□□ -1.3
CUX1-220ENST00000607092 ANAPC15P60006 121 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 IRX6P78412 446 aaPredicted RBP6.91□□□□□ -1.3
CUX1-220ENST00000607092 STK3Q13188 491 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PTPAQ15257 358 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 DGKKQ5KSL6 1271 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 ZNF280DQ6N043 979 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 POTEGQ6S5H5 508 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 HAUS6Q7Z4H7 955 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 YAF2Q8IY57 180 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 SYNPOQ8N3V7 929 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 SPEM1Q8N4L4 309 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 DCLK2Q8N568 766 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 TMC2Q8TDI7 906 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PIGOQ8TEQ8 1089 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 SMARCD2Q92925 531 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 EXOC4Q96A65 974 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 ZNF512Q96ME7 567 aaPredicted RBP6.91□□□□□ -1.3
CUX1-220ENST00000607092 KXD1Q9BQD3 176 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 PDZD7Q9H5P4 517 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 C17orf75Q9HAS0 396 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 TRPV4Q9HBA0 871 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 ASAH2Q9NR71 780 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 DNMT3BQ9UBC3 853 aaKnown RBP6.91□□□□□ -1.3
CUX1-220ENST00000607092 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
CUX1-220ENST00000607092 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
CUX1-220ENST00000607092 F8W810 466 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 SLC30A4O14863 429 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 ZNF263O14978 683 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 ZBTB39O15060 712 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 XPOTO43592 962 aaKnown RBP6.9□□□□□ -1.3
CUX1-220ENST00000607092 ABLIM3O94929 683 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 PAPSS2O95340 614 aaPredicted RBP6.9□□□□□ -1.3
CUX1-220ENST00000607092 ADRB1P08588 477 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 SCP2P22307 547 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
CUX1-220ENST00000607092 RPA1P27694 616 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 MARCKSP29966 332 aaPredicted RBP6.9□□□□□ -1.3
CUX1-220ENST00000607092 HOXA6P31267 233 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 GRM5P41594 1212 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 NTHL1P78549 312 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 AMPD2Q01433 879 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 ROR1Q01973 937 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 SCRN1Q12765 414 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 MTAPQ13126 283 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 NAB2Q15742 525 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 CSRP2Q16527 193 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 KYAT1Q16773 422 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 UPP1Q16831 310 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 ATF7IP2Q5U623 682 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
CUX1-220ENST00000607092 CDR2LQ86X02 465 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms