RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EFCAB8A8MWE9 144 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TXNL1O43396 289 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PIAS2O75928 621 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PDGFAP04085 211 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ESRRAP11474 423 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GNAT1P11488 350 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CPEP16870 476 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ARHGAP25P42331 645 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 OXCT1P55809 520 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NFIAQ12857 509 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 COASYQ13057 564 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 USH1GQ495M9 461 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CREB3L3Q68CJ9 461 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TTBK2Q6IQ55 1244 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 OLFM4Q6UX06 510 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NCCRP1Q6ZVX7 275 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 BZW1Q7L1Q6 419 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NXPE1Q8N323 547 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 AADATQ8N5Z0 425 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 KCTD6Q8NC69 237 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SIMC1Q8NDZ2 872 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NEDD1Q8NHV4 660 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DEPTORQ8TB45 409 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 RHOVQ96L33 236 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ZSCAN31Q96LW9 406 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NAP1L3Q99457 506 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 VCX3BQ9H321 246 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SEMA4AQ9H3S1 761 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SYNCQ9H7C4 482 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 RPS6KA6Q9UK32 745 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TMCO1Q9UM00 188 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ZFYVE9O95405 1425 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SLIT2O94813 1529 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CDC42BPGQ6DT37 1551 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ERBINQ96RT1 1412 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR75-ASB3A0A0A6YYF3 556 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GOLGA6L10A0A0M3HER8 536 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GOLGA6L4A6NEF3 574 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TRIM38O00635 465 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ATXN7O15265 892 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 RASSF9O75901 435 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DDHD2O94830 711 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 FGFR1P11362 822 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PORP16435 677 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 HOXD13P35453 343 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 EPHA4P54764 986 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 IFI35P80217 286 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PABPC1LQ4VXU2 614 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ZSCAN25Q6NSZ9 544 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DENND5BQ6ZUT9 1274 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 DGLUCYQ7Z3D6 616 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SLC15A3Q8IY34 581 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CNNM3Q8NE01 707 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 OR52K2Q8NGK3 314 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PLBD2Q8NHP8 589 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ZSCAN18Q8TBC5 510 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 USP13Q92995 863 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 FERMT2Q96AC1 680 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ACSBG1Q96GR2 724 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 MFSD14AQ96MC6 490 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SPATA9Q9BWV2 254 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 LSM14BQ9BX40 385 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NT5C1AQ9BXI3 368 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 BCO2Q9BYV7 579 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 FOXP3Q9BZS1 431 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 YIPF3Q9GZM5 350 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GPAMQ9HCL2 828 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 POLMQ9NP87 494 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PRDM5Q9NQX1 630 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TNNQ9UQP3 1299 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PPIP5K1Q6PFW1 1433 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NUDT19A8MXV4 375 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 FOXO6A8MYZ6 492 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 UPK3BL1B0FP48 263 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 UPK3BL2E5RIL1 263 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 LSM1O15116 133 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CAPN5O15484 640 aaPredicted RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 SEC31AO94979 1220 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 BMP2P12643 396 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 EEF2P13639 858 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 JUPP14923 745 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 HDCP19113 662 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 PEX2P28328 305 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ACSL1P33121 698 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CACNB3P54284 484 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 ACY1Q03154 408 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 EXOSC9Q06265 439 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 IFFO1Q0D2I5 559 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CBX3Q13185 183 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 NR5A1Q13285 461 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 TRPC3Q13507 836 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 GTF2H3Q13889 308 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 LASP1Q14847 261 aaKnown RBP5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 BBS9Q3SYG4 887 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 CLEC2AQ6UVW9 174 aa5.37□□□□□ -1.55
SPTBN1-206ENST00000602898 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms