RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 TRIM11Q96F44 468 aa15.42■□□□□ 0.06
SMG9-211ENST00000601170 DDX27Q96GQ7 796 aaKnown RBP15.42■□□□□ 0.06
SMG9-211ENST00000601170 FNBP1Q96RU3 617 aa15.42■□□□□ 0.06
SMG9-211ENST00000601170 DCLK3Q9C098 648 aa15.42■□□□□ 0.06
SMG9-211ENST00000601170 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
SMG9-211ENST00000601170 CYP26B1Q9NR63 512 aa15.42■□□□□ 0.06
SMG9-211ENST00000601170 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMG9-211ENST00000601170 MAFGO15525 162 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 EXTL3O43909 919 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 CYP1A1P04798 512 aaPredicted RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 DPEP1P16444 411 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 KCNA3P22001 575 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 IVDP26440 423 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 MAN1A1P33908 653 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 ITGA8P53708 1063 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.067e-6■■□□□ 12
SMG9-211ENST00000601170 CNGA2Q16280 664 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 ZACNQ401N2 412 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 ANKS4BQ8N8V4 417 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 GRK7Q8WTQ7 553 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 JPH1Q9HDC5 661 aaPredicted RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 KLC4Q9NSK0 619 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 DNAJC17Q9NVM6 304 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 STK32BQ9NY57 414 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 R3HDM2Q9Y2K5 976 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 O00370 1275 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 GAS8O95995 478 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 FDX1P10109 184 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 PIK3CAP42336 1068 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 NLRP11P59045 1033 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 TNFAIP1Q13829 316 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 PSMD6Q15008 389 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 SYDE1Q6ZW31 735 aaPredicted RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 MON1BQ7L1V2 547 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 PIGWQ7Z7B1 504 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 CCDC50Q8IVM0 306 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 IPO4Q8TEX9 1081 aaKnown RBP15.41■□□□□ 0.06
SMG9-211ENST00000601170 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 KDM4CQ9H3R0 1056 aa15.41■□□□□ 0.06
SMG9-211ENST00000601170 UMODL1Q5DID0 1318 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 C4BPAP04003 597 aaKnown RBP15.4■□□□□ 0.06
SMG9-211ENST00000601170 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
SMG9-211ENST00000601170 GHRP10912 638 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 RALAP11233 206 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 ATF2P15336 505 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 ACOT2P49753 483 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 BPIFB4P59827 614 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 CLDN10P78369 228 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 C11orf70Q9BRQ4 267 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 GINM1Q9NU53 330 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 SAMD15Q9P1V8 674 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 PTPRJQ12913 1337 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 CCT8L1PA6NM43 557 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 PROSCO94903 275 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 CFHP08603 1231 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 VPS41P49754 854 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 ACTR2P61160 394 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 NSUN6Q8TEA1 469 aaKnown RBP15.4■□□□□ 0.06
SMG9-211ENST00000601170 ARHGEF2Q92974 986 aaKnown RBP15.4■□□□□ 0.06
SMG9-211ENST00000601170 SERPINB12Q96P63 405 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 HAUS2Q9NVX0 235 aa15.4■□□□□ 0.06
SMG9-211ENST00000601170 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 H0YCG3 227 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 TTC4O95801 387 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 ACO1P21399 889 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 KLF1Q13351 362 aaPredicted RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 ITIH4Q14624 930 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 ATL2Q8NHH9 583 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 FAM118BQ9BPY3 351 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 ELAC2Q9BQ52 826 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 HOMER3Q9NSC5 361 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 CTNNAL1Q9UBT7 734 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 AGO2Q9UKV8 859 aaKnown RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 RLFQ13129 1914 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 DOCK1Q14185 1865 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 VNN1O95497 513 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 CREB1P16220 341 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 SSTR3P32745 418 aaPredicted RBP15.39■□□□□ 0.05
SMG9-211ENST00000601170 DSG3P32926 999 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 ADCY8P40145 1251 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 TAS2R40P59535 323 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 PTP4A2Q12974 167 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 STRN3Q13033 797 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 CUL2Q13617 745 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 EMC2Q15006 297 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 LRRC14Q15048 493 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 KYNUQ16719 465 aa15.39■□□□□ 0.05
SMG9-211ENST00000601170 ABHD15Q6UXT9 468 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms