RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 BEST2Q8NFU1 509 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 SLC9A7Q96T83 725 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 GOLGA2P5Q9HBQ8 144 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 TBC1D13Q9NVG8 400 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 DPP3Q9NY33 737 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 IFNKQ9P0W0 207 aa22.1■■□□□ 1.13
PNKP-215ENST00000600910 TDRD15B5MCY1 1934 aaKnown RBP22.1■■□□□ 1.13
PNKP-215ENST00000600910 FNDC1Q4ZHG4 1894 aaPredicted RBP22.1■■□□□ 1.13
PNKP-215ENST00000600910 N4BP1O75113 896 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 GJB5O95377 273 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 MYL7Q01449 175 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 RNASELQ05823 741 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 PAN2Q504Q3 1202 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 PHOSPHO2Q8TCD6 241 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 RSPH1Q8WYR4 309 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 ZNF689Q96CS4 500 aaPredicted RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 RNPC3Q96LT9 517 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 GRPEL1Q9HAV7 217 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 RTN4Q9NQC3 1192 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 COL4A6Q14031 1691 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 LAMA2P24043 3122 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 ATP2A2P16615 1042 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 CYP3A5P20815 502 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 SCARA3Q6AZY7 606 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 SARM1Q6SZW1 724 aa22.09■■□□□ 1.13
PNKP-215ENST00000600910 MRPL9Q9BYD2 267 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 RC3H2Q9HBD1 1191 aaKnown RBP22.09■■□□□ 1.13
PNKP-215ENST00000600910 PHACTR2O75167 634 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 ITGB3P05106 788 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 UBXN1Q04323 297 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 FKBP15Q5T1M5 1219 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 ZNF280BQ86YH2 543 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 HERC6Q8IVU3 1022 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 YME1L1Q96TA2 773 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 ZBED2Q9BTP6 218 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 XPO4Q9C0E2 1151 aaKnown RBP22.08■■□□□ 1.13
PNKP-215ENST00000600910 ITGA11Q9UKX5 1188 aa22.08■■□□□ 1.13
PNKP-215ENST00000600910 RANBP2P49792 3224 aaKnown RBP22.07■■□□□ 1.12
PNKP-215ENST00000600910 PMM2O15305 246 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 P4HA2O15460 535 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 TEX33O43247 280 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 DDHD2O94830 711 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 VNN1O95497 513 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 KRT19P08727 400 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
PNKP-215ENST00000600910 TUSC3Q13454 348 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 NR1I3Q14994 352 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 LRRC43Q8N309 656 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 CXorf38Q8TB03 319 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 TAS1R2Q8TE23 839 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 HCSTQ9UBK5 93 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 CACNG4Q9UBN1 327 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 SIX4Q9UIU6 781 aa22.07■■□□□ 1.12
PNKP-215ENST00000600910 CASTOR2A6NHX0 329 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 B4GALT3O60512 393 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 CST3P01034 146 aaPredicted RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 POLR2BP30876 1174 aaKnown RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 PIK3CAP42336 1068 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 CETN1Q12798 172 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 FBXL13Q8NEE6 735 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 FAM193BQ96PV7 902 aaPredicted RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 CRACR2AQ9BSW2 395 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 TRIM5Q9C035 493 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 COQ4Q9Y3A0 265 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 GTPBP10A4D1E9 387 aaKnown RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 CBFA2T2O43439 604 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 HLA-DRAP01903 254 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 LRPAP1P30533 357 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 HTRA4P83105 476 aaPredicted RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 DSC1Q08554 894 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 TRPC3Q13507 836 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 NCOA4Q13772 614 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 EPC2Q52LR7 807 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 CMTR2Q8IYT2 770 aaKnown RBP22.06■■□□□ 1.12
PNKP-215ENST00000600910 SEMA4DQ92854 862 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 PAAF1Q9BRP4 392 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 NRDE2Q9H7Z3 1164 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 RAB20Q9NX57 234 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 GCNT4Q9P109 453 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 DNAJB4Q9UDY4 337 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 AGAP1Q9UPQ3 857 aa22.06■■□□□ 1.12
PNKP-215ENST00000600910 ANO9A1A5B4 782 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 PPEF2O14830 753 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 LRRN2O75325 713 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 TPM3P06753 285 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 CLCNKBP51801 687 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 BTG3Q14201 252 aaPredicted RBP22.05■■□□□ 1.12
PNKP-215ENST00000600910 PTPN21Q16825 1174 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 EXOC3L4Q17RC7 722 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 C9orf57Q5W0N0 161 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 GBP6Q6ZN66 633 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 COLGALT2Q8IYK4 626 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 INSL6Q9Y581 213 aa22.05■■□□□ 1.12
PNKP-215ENST00000600910 ZC3H11AO75152 810 aaKnown RBP eCLIP22.04■■□□□ 1.12
PNKP-215ENST00000600910 RBP5P82980 135 aa22.04■■□□□ 1.12
PNKP-215ENST00000600910 KCNMA1Q12791 1236 aa22.04■■□□□ 1.12
PNKP-215ENST00000600910 RABGGTAQ92696 567 aa22.04■■□□□ 1.12
PNKP-215ENST00000600910 UROC1Q96N76 676 aa22.04■■□□□ 1.12
PNKP-215ENST00000600910 RAD9AQ99638 391 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms