RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 TRABD2AQ86V40 505 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 SPATA24Q86W54 205 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 LRRC6Q86X45 466 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 PHF24Q9UPV7 400 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 PDXKO00764 312 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 BANF1O75531 89 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
SYDE1-204ENST00000600440 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.32
SYDE1-204ENST00000600440 KDSRQ06136 332 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 LCA5Q86VQ0 697 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
SYDE1-204ENST00000600440 NSL1Q96IY1 281 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 HERPUD2Q9BSE4 406 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 TAS2R1Q9NYW7 299 aa17.08■□□□□ 0.32
SYDE1-204ENST00000600440 ECE2O60344 883 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 RNASEH1O60930 286 aaKnown RBP17.07■□□□□ 0.32
SYDE1-204ENST00000600440 POLD1P28340 1107 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 DSG1Q02413 1049 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 TTBK2Q6IQ55 1244 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 GPR88Q9GZN0 384 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
SYDE1-204ENST00000600440 STX18Q9P2W9 335 aaKnown RBP17.07■□□□□ 0.32
SYDE1-204ENST00000600440 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 PSMC4P43686 418 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 ARFIP2P53365 341 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 SLC45A4Q5BKX6 768 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 SATL1Q86VE3 508 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 ST13P4Q8IZP2 240 aaPredicted RBP17.07■□□□□ 0.32
SYDE1-204ENST00000600440 MAML1Q92585 1016 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 WNT8AQ9H1J5 351 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 B2RBV5 119 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 SGPL1O95470 568 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 GYS1P13807 737 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 STAT4Q14765 748 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 THTPAQ9BU02 230 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 NDE1Q9NXR1 346 aa17.07■□□□□ 0.32
SYDE1-204ENST00000600440 HNRNPCP07910 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
SYDE1-204ENST00000600440 IMPDH2P12268 514 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 CDK8P49336 464 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 NOP14P78316 857 aaKnown RBP17.06■□□□□ 0.32
SYDE1-204ENST00000600440 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 C11orf63Q6NUN7 778 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 ANKFY1Q9P2R3 1169 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 SERPINA10Q9UK55 444 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 CHMP2AO43633 222 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 FAM13AO94988 1023 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 GGPS1O95749 300 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 ZSCAN5DPP0CG00 497 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 DESP17661 470 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 ATF3P18847 181 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 NR1H3Q13133 447 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 MAP7Q14244 749 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 KAZNQ674X7 775 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 LLGL2Q6P1M3 1020 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
SYDE1-204ENST00000600440 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
SYDE1-204ENST00000600440 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 FOXR2Q6PJQ5 311 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 MARK2Q7KZI7 788 aaKnown RBP17.05■□□□□ 0.32
SYDE1-204ENST00000600440 ARHGAP18Q8N392 663 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 ANGPTL2Q9UKU9 493 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 C2CD2LO14523 706 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 CYP26A1O43174 497 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 TGFB1I1O43294 461 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 ZWINTO95229 277 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 HARSP12081 509 aaKnown RBP17.05■□□□□ 0.32
SYDE1-204ENST00000600440 GCLMP48507 274 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 CTC1Q2NKJ3 1217 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 C1orf146Q5VVC0 180 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 CEP70Q8NHQ1 597 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 MAK16Q9BXY0 300 aaKnown RBP17.05■□□□□ 0.32
SYDE1-204ENST00000600440 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 LGALS13Q9UHV8 139 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 USTQ9Y2C2 406 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 ZBTB39O15060 712 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 ANPEPP15144 967 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 IVDP26440 423 aa17.05■□□□□ 0.32
SYDE1-204ENST00000600440 CDK7P50613 346 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms