RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 NOP14P78316 857 aaKnown RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 KLHL30Q0D2K2 578 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 PAK2Q13177 524 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 TMEM132DQ14C87 1099 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 ASTE1Q2TB18 679 aaPredicted RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 WDR44Q5JSH3 913 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 ALKAL1Q6UXT8 129 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CCDC170Q8IYT3 715 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CXorf38Q8TB03 319 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CCDC42Q96M95 316 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 HAUS4Q9H6D7 363 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 PLEKHA5Q9HAU0 1116 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 CHST12Q9NRB3 414 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 PDCD11Q14690 1871 aaKnown RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 A0A0U1RQJ8 604 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 MGEA5O60502 916 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 ASS1P00966 412 aaKnown RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 TFRCP02786 760 aaKnown RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 PRKCIP41743 596 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 YARSP54577 528 aaKnown RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 MFAP3P55082 362 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 GCNT1Q02742 428 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 MAPK8IP2Q13387 824 aaPredicted RBP25.13■■□□□ 1.61
SYMPK-212ENST00000598896 ATRIPQ8WXE1 791 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 SHC3Q92529 594 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 NUB1Q9Y5A7 615 aa25.13■■□□□ 1.61
SYMPK-212ENST00000598896 SSU72P8A0A1W2PR75 194 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 GUCY2FP51841 1108 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 KIF11P52732 1056 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 ATN1P54259 1190 aaPredicted RBP25.12■■□□□ 1.61
SYMPK-212ENST00000598896 PTK2Q05397 1052 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 PKN2Q16513 984 aaKnown RBP25.12■■□□□ 1.61
SYMPK-212ENST00000598896 CD302Q8IX05 232 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 REXO1L1PQ8IX06 675 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 KIF12Q96FN5 646 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 XYLT2Q9H1B5 865 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 FAM105AQ9NUU6 356 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 RNF19AQ9NV58 838 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 KLK14Q9P0G3 267 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 PCDHB2Q9Y5E7 798 aa25.12■■□□□ 1.61
SYMPK-212ENST00000598896 ZNF263O14978 683 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 CCDC175P0C221 793 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 GLRA4Q5JXX5 417 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 DIS3LQ8TF46 1054 aaKnown RBP25.11■■□□□ 1.61
SYMPK-212ENST00000598896 CNTN3Q9P232 1028 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 SQORQ9Y6N5 450 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 MKI67P46013 3256 aaKnown RBP25.11■■□□□ 1.61
SYMPK-212ENST00000598896 MEIS3P2A8K0S8 358 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 PQBP1O60828 265 aaKnown RBP25.11■■□□□ 1.61
SYMPK-212ENST00000598896 ITGB3P05106 788 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 FERP16591 822 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 CYLC1P35663 651 aaPredicted RBP25.11■■□□□ 1.61
SYMPK-212ENST00000598896 TRPC3Q13507 836 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 ZNF571Q7Z3V5 609 aaPredicted RBP25.11■■□□□ 1.61
SYMPK-212ENST00000598896 USP38Q8NB14 1042 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 CAGE1Q8TC20 777 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 DEF6Q9H4E7 631 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 PARP2Q9UGN5 583 aa25.11■■□□□ 1.61
SYMPK-212ENST00000598896 EIF3CLB5ME19 914 aaKnown RBP25.1■■□□□ 1.61
SYMPK-212ENST00000598896 KRT19P08727 400 aa25.1■■□□□ 1.61
SYMPK-212ENST00000598896 DSC3Q14574 896 aa25.1■■□□□ 1.61
SYMPK-212ENST00000598896 NT5DC4Q86YG4 428 aa25.1■■□□□ 1.61
SYMPK-212ENST00000598896 EIF3CQ99613 913 aaKnown RBP25.1■■□□□ 1.61
SYMPK-212ENST00000598896 IMPG2Q9BZV3 1241 aa25.1■■□□□ 1.61
SYMPK-212ENST00000598896 CYP27A1Q02318 531 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 GFPT1Q06210 699 aaPredicted RBP25.09■■□□□ 1.61
SYMPK-212ENST00000598896 ZBTB6Q15916 424 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 SGSM1Q2NKQ1 1148 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 SLC39A5Q6ZMH5 540 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 FAM71AQ8IYT1 594 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 OLIG1Q8TAK6 271 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 DERAQ9Y315 318 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 AKR1B10O60218 316 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 CLSTN1O94985 981 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 COL6A1P12109 1028 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 ZSCAN20P17040 1043 aaPredicted RBP25.09■■□□□ 1.61
SYMPK-212ENST00000598896 CUL2Q13617 745 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 XKR4Q5GH76 650 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 LRRC8DQ7L1W4 858 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 ENOSF1Q7L5Y1 443 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 DPP3Q9NY33 737 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 TUBGCP4Q9UGJ1 667 aa25.09■■□□□ 1.61
SYMPK-212ENST00000598896 BZW2Q9Y6E2 419 aaKnown RBP25.09■■□□□ 1.61
SYMPK-212ENST00000598896 ZSCAN12O43309 604 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 LCA5LO95447 670 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 USP8P40818 1118 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 GJA8P48165 433 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 ZNF699Q32M78 642 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 C18orf25Q96B23 403 aaPredicted RBP25.08■■□□□ 1.61
SYMPK-212ENST00000598896 ACP6Q9NPH0 428 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 ADAMTS1Q9UHI8 967 aa25.08■■□□□ 1.61
SYMPK-212ENST00000598896 SMIM28A0A1B0GU29 152 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 SELPP16109 830 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 POLR2BP30876 1174 aaKnown RBP25.07■■□□□ 1.6
SYMPK-212ENST00000598896 ANKRD33Q7Z3H0 272 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 FAM81BQ96LP2 452 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 C16orf45Q96MC5 204 aaPredicted RBP25.07■■□□□ 1.6
SYMPK-212ENST00000598896 SYT11Q9BT88 431 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 TRAIPQ9BWF2 469 aa25.07■■□□□ 1.6
SYMPK-212ENST00000598896 TFR2Q9UP52 801 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms