RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TRIP11Q15643 1979 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 ABLIM3O94929 683 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 EDN1P05305 212 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 MCF2P10911 925 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 ATF2P15336 505 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 NPTX2P47972 431 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 PEX3P56589 373 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 ROR1Q01973 937 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 PUM1Q14671 1186 aaKnown RBP eCLIP18.63■□□□□ 0.57
PNKP-210ENST00000597965 VARS2Q5ST30 1063 aaKnown RBP18.63■□□□□ 0.57
PNKP-210ENST00000597965 TPGS2Q68CL5 300 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 ALKAL1Q6UXT8 129 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 CCDC83Q8IWF9 413 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 KCTD17Q8N5Z5 321 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 IGSF22Q8N9C0 903 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 ST13P5Q8NFI4 369 aaPredicted RBP18.63■□□□□ 0.57
PNKP-210ENST00000597965 DNASE1L2Q92874 299 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 CXCL16Q9H2A7 254 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 LTB4R2Q9NPC1 389 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 KMT5AQ9NQR1 393 aa18.63■□□□□ 0.57
PNKP-210ENST00000597965 PODXLO00592 558 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 GLULP15104 373 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 KCNE1P15382 129 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 SDHBP21912 280 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 RPS9P46781 194 aaKnown RBP18.62■□□□□ 0.57
PNKP-210ENST00000597965 STRN3Q13033 797 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 PPP2R5DQ14738 602 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 MPZL3Q6UWV2 235 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 TCEAL8Q8IYN2 117 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 KIAA2013Q8IYS2 634 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 LEMD2Q8NC56 503 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 APPL2Q8NEU8 664 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 ING5Q8WYH8 240 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 OXCT2Q9BYC2 517 aaPredicted RBP18.62■□□□□ 0.57
PNKP-210ENST00000597965 CDT1Q9H211 546 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 GOLGA2P5Q9HBQ8 144 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 PTPRHQ9HD43 1115 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 SH2B1Q9NRF2 756 aaPredicted RBP18.62■□□□□ 0.57
PNKP-210ENST00000597965 ARHGAP28Q9P2N2 729 aa18.62■□□□□ 0.57
PNKP-210ENST00000597965 CITO14578 2027 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 MAN2B1O00754 1011 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 BRCC3P46736 316 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 SMTNP53814 917 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 OSTNP61366 133 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 ECM1Q16610 540 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 CYP4A22Q5TCH4 519 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 TPRG1Q6ZUI0 275 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 PDZD4Q76G19 769 aaPredicted RBP18.61■□□□□ 0.57
PNKP-210ENST00000597965 DGLUCYQ7Z3D6 616 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 C3orf58Q8NDZ4 430 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 CLDN23Q96B33 292 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 MCRS1Q96EZ8 462 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 NTPCRQ9BSD7 190 aaKnown RBP18.61■□□□□ 0.57
PNKP-210ENST00000597965 IER2Q9BTL4 223 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 FAM126AQ9BYI3 521 aaPredicted RBP18.61■□□□□ 0.57
PNKP-210ENST00000597965 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 ZFP14Q9HCL3 533 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 CNTN3Q9P232 1028 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 KIF3AQ9Y496 699 aa18.61■□□□□ 0.57
PNKP-210ENST00000597965 WDR27A2RRH5 827 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 HIP1RO75146 1068 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 U2AF2P26368 475 aaKnown RBP eCLIP18.6■□□□□ 0.57
PNKP-210ENST00000597965 MARCKSP29966 332 aaPredicted RBP18.6■□□□□ 0.57
PNKP-210ENST00000597965 PRPHP41219 470 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 CSTF1Q05048 431 aaKnown RBP18.6■□□□□ 0.57
PNKP-210ENST00000597965 ADCY1Q08828 1119 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 PTGDRQ13258 359 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 ZNF280DQ6N043 979 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 CD300LGQ6UXG3 332 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 DTHD1Q6ZMT9 781 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 C4orf32Q8N8J7 132 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 IRF7Q92985 503 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 CORO1BQ9BR76 489 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 ZSCAN32Q9NX65 697 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 KCND2Q9NZV8 630 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 NOTCH4Q99466 2003 aa18.6■□□□□ 0.57
PNKP-210ENST00000597965 OTOGLQ3ZCN5 2332 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 H0YCG3 227 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 I3L4J1 428 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 TOM1L1O75674 476 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 PROZP22891 400 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 MCM4P33991 863 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 ARPP19P56211 112 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 SOX4Q06945 474 aaPredicted RBP18.59■□□□□ 0.57
PNKP-210ENST00000597965 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 MAML2Q8IZL2 1156 aaPredicted RBP18.59■□□□□ 0.57
PNKP-210ENST00000597965 CEP120Q8N960 986 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 SUMF1Q8NBK3 374 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 RMDN1Q96DB5 314 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 SUSD3Q96L08 255 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 ZNF512Q96ME7 567 aaPredicted RBP18.59■□□□□ 0.57
PNKP-210ENST00000597965 TRMT61BQ9BVS5 477 aaKnown RBP18.59■□□□□ 0.57
PNKP-210ENST00000597965 TARS2Q9BW92 718 aaKnown RBP18.59■□□□□ 0.57
PNKP-210ENST00000597965 GPR88Q9GZN0 384 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 BRD9Q9H8M2 597 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 POLD4Q9HCU8 107 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 INSL5Q9Y5Q6 135 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms