RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 ODF2LQ9ULJ1 636 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 CDY1Q9Y6F8 540 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 MORC2Q9Y6X9 1032 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-208ENST00000595756 CFAP54Q96N23 3096 aa19.57■□□□□ 0.72
HOMER3-208ENST00000595756 NOTCH4Q99466 2003 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 SFI1A8K8P3 1242 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 NPR3P17342 541 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 BRCC3P46736 316 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 NCKAP1LP55160 1127 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 AXDND1Q5T1B0 1012 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-208ENST00000595756 GRASPQ7Z6J2 395 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-208ENST00000595756 SLC44A3Q8N4M1 653 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 FLCNQ8NFG4 579 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 ATOH1Q92858 354 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-208ENST00000595756 FAM86C1Q9NVL1 165 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 CFAP45Q9UL16 551 aa19.56■□□□□ 0.72
HOMER3-208ENST00000595756 H0Y858 1186 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 SYN3O14994 580 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 CCL16O15467 120 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 MEFVO15553 781 aaPredicted RBP19.55■□□□□ 0.72
HOMER3-208ENST00000595756 HARSP12081 509 aaKnown RBP19.55■□□□□ 0.72
HOMER3-208ENST00000595756 SCP2P22307 547 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 RPL9P32969 192 aaKnown RBP19.55■□□□□ 0.72
HOMER3-208ENST00000595756 MCL1Q07820 350 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 SLC8B1Q6J4K2 584 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 RSPO2Q6UXX9 243 aaPredicted RBP19.55■□□□□ 0.72
HOMER3-208ENST00000595756 CALML4Q96GE6 196 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 PLIN2Q99541 437 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 RTP3Q9BQQ7 232 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 CDH7Q9ULB5 785 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 CLIC4Q9Y696 253 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 NUMBLQ9Y6R0 609 aa19.55■□□□□ 0.72
HOMER3-208ENST00000595756 I3L4J1 428 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 CFHP08603 1231 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 LONP1P36776 959 aaKnown RBP19.54■□□□□ 0.72
HOMER3-208ENST00000595756 ARSHQ5FYA8 562 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 VARS2Q5ST30 1063 aaKnown RBP19.54■□□□□ 0.72
HOMER3-208ENST00000595756 FAM173BQ6P4H8 233 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 ZBTB45Q96K62 511 aaPredicted RBP19.54■□□□□ 0.72
HOMER3-208ENST00000595756 SLC2A4RGQ9NR83 387 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 KCNH3Q9ULD8 1083 aa19.54■□□□□ 0.72
HOMER3-208ENST00000595756 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.54■□□□□ 0.72
HOMER3-208ENST00000595756 PROB1E7EW31 1015 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 CLDN3O15551 220 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 UBA7P41226 1012 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 NASPP49321 788 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-208ENST00000595756 ZNF131P52739 623 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 NTHL1P78549 312 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 ROR1Q01973 937 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-208ENST00000595756 PKP1Q13835 747 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 SLC39A14Q15043 492 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 PTPAQ15257 358 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 SLC10A6Q3KNW5 377 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 FOXD4L5Q5VV16 416 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-208ENST00000595756 MTSS1LQ765P7 747 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 CCDC105Q8IYK2 499 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 FOXD4L4Q8WXT5 416 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-208ENST00000595756 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-208ENST00000595756 USP28Q96RU2 1077 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 POLIQ9UNA4 740 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 NUB1Q9Y5A7 615 aa19.53■□□□□ 0.72
HOMER3-208ENST00000595756 ZFHX2Q9C0A1 2572 aaPredicted RBP19.52■□□□□ 0.72
HOMER3-208ENST00000595756 NPHP3-ACAD11A0A0J9YXS1 232 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 WDR27A2RRH5 827 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 KRBA1A5PL33 1030 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 H7C4K7 107 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 TBC1D4O60343 1298 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 YEATS4O95619 227 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 STK38Q15208 465 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 PABPC1LQ4VXU2 614 aaKnown RBP19.52■□□□□ 0.72
HOMER3-208ENST00000595756 GPBP1Q86WP2 473 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 ZNF461Q8TAF7 563 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 GPR152Q8TDT2 470 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 LRRC15Q8TF66 581 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 FGF13Q92913 245 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 FGF14Q92915 247 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 BICD1Q96G01 975 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 SUSD3Q96L08 255 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 PLEKHA5Q9HAU0 1116 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 ARHGEF3Q9NR81 526 aa19.52■□□□□ 0.72
HOMER3-208ENST00000595756 TSC2P49815 1807 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 ARHGEF37A1IGU5 675 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 K7ENM7 598 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 ABLIM3O94929 683 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 PIGRP01833 764 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 CLTAP09496 248 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 CXCL8P10145 99 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 PLCG1P19174 1290 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 NBL1P41271 181 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 CEBPZQ03701 1054 aaKnown RBP19.51■□□□□ 0.71
HOMER3-208ENST00000595756 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
HOMER3-208ENST00000595756 KYAT1Q16773 422 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 HAUS6Q7Z4H7 955 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 HAPLN2Q9GZV7 340 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 PARVGQ9HBI0 331 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 AVENQ9NQS1 362 aaPredicted RBP19.51■□□□□ 0.71
HOMER3-208ENST00000595756 BLOC1S4Q9NUP1 217 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms