RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 VWA8A3KMH1 1905 aa15.21■□□□□ 0.02
SHKBP1-208ENST00000595726 COL4A2P08572 1712 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 ARHGEF37A1IGU5 675 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 ARNTLO00327 626 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 PRRG1O14668 218 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 DKC1O60832 514 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 MOSPD3O75425 235 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 PAPSS2O95340 614 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 SEC24AO95486 1093 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 ARPP19P56211 112 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 CYP4A11Q02928 519 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 RING1Q06587 406 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 PPP2R5CQ13362 524 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 TFDP1Q14186 410 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 NTRK3Q16288 839 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 CD300LGQ6UXG3 332 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 WDR5BQ86VZ2 330 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 CCDC148Q8NFR7 591 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 RSPRY1Q96DX4 576 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 WASF3Q9UPY6 502 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 PPME1Q9Y570 386 aa15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 SMG1Q96Q15 3661 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 FLNBO75369 2602 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-208ENST00000595726 A0A087WWV3 80 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 EXTL3O43909 919 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 B3GAT3O94766 335 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 EPN2O95208 641 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 GLRA2P23416 452 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 PDIA3P30101 505 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 ELF1P32519 619 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 ARL2P36404 184 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 BRCC3P46736 316 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 RAP1GAPP47736 663 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 NOVA1P51513 510 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 ROR1Q01973 937 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 POU5F1BQ06416 359 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 LRRC32Q14392 662 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 PLA2G2CQ5R387 149 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 PDZD4Q76G19 769 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 RTL10Q7L3V2 364 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 NOSTRINQ8IVI9 506 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 MFSD6LQ8IWD5 586 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 COL26A1Q96A83 441 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 BACE2Q9Y5Z0 518 aa15.19■□□□□ 0.02
SHKBP1-208ENST00000595726 SOBPA7XYQ1 873 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 HEPACAM2A8MVW5 462 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 ZNF197O14709 1029 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 TBX3O15119 743 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 RECQL4O94761 1208 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 CLCNKBP51801 687 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 EPHA7Q15375 998 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 INF2Q27J81 1249 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 NCAPH2Q6IBW4 605 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 PKN3Q6P5Z2 889 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 CACNA2D4Q7Z3S7 1137 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 TPH2Q8IWU9 490 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 ZNF461Q8TAF7 563 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 CSGALNACT1Q8TDX6 532 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 DEPDC1BQ8WUY9 529 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 ADAM33Q9BZ11 813 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 PCDHA4Q9UN74 947 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 LHX6Q9UPM6 363 aa15.18■□□□□ 0.02
SHKBP1-208ENST00000595726 GREB1Q4ZG55 1949 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ZMYM2Q9UBW7 1377 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 C4orf47A7E2U8 309 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 M0R2N6 131 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 RPP40O75818 363 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ABLIM3O94929 683 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 MYL4P12829 197 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 HOXA6P31267 233 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ANAPC15P60006 121 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ZNF252P-AS1Q0IIN9 211 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 PON2Q15165 354 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 CYP4A22Q5TCH4 519 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ANKS3Q6ZW76 656 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 BLIDQ8IZY5 108 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 C3orf58Q8NDZ4 430 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 HAS1Q92839 578 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 LOXL4Q96JB6 756 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 ZSWIM4Q9H7M6 989 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 GOLGA2P5Q9HBQ8 144 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 POLR3BQ9NW08 1133 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 CEP72Q9P209 647 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 GDAQ9Y2T3 454 aa15.17■□□□□ 0.02
SHKBP1-208ENST00000595726 BPTFQ12830 3046 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms