RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TDRD5Q8NAT2 981 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 LNX1Q8TBB1 728 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 STAMQ92783 540 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 ACCSQ96QU6 501 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PANK2Q9BZ23 570 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 GOLGA2P5Q9HBQ8 144 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PANK4Q9NVE7 773 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 MTRRQ9UBK8 725 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 DERAQ9Y315 318 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 STYXL1Q9Y6J8 313 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 PIEZO1Q92508 2521 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 MTCL1Q9Y4B5 1905 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 TRIOO75962 3097 aa19.31■□□□□ 0.68
SHKBP1-204ENST00000594862 A0A087X0B3 334 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 FAM189A1O60320 539 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 GCNT3O95395 438 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 ADRB2P07550 413 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 E2F4Q16254 413 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 SEZ6Q53EL9 994 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 ZC2HC1CQ53FD0 456 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 ADALQ6DHV7 355 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 LILRA6Q6PI73 481 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 OTOP3Q7RTS5 596 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 PALB2Q86YC2 1186 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 SPRYD3Q8NCJ5 442 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 KREMEN2Q8NCW0 462 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 C3orf58Q8NDZ4 430 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 KIF12Q96FN5 646 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 HAPLN2Q9GZV7 340 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 ASB7Q9H672 318 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 TMEM206Q9H813 350 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 MUTYHQ9UIF7 546 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 FBXW11Q9UKB1 542 aa19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 CPSF3Q9UKF6 684 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-204ENST00000594862 PRR33A8MZF0 331 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 H7C4K7 107 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 HNRNPA1P09651 372 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 LRPAP1P30533 357 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 MCM4P33991 863 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 RAB33AQ14088 237 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 ENOX2Q16206 610 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 CNNM4Q6P4Q7 775 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 SHC4Q6S5L8 630 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 ZDHHC14Q8IZN3 488 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 APPL2Q8NEU8 664 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 C18orf25Q96B23 403 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 DHX58Q96C10 678 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 CLSTN3Q9BQT9 956 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 AGO2Q9UKV8 859 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 HCN4Q9Y3Q4 1203 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 VWA8A3KMH1 1905 aa19.29■□□□□ 0.68
SHKBP1-204ENST00000594862 CCDC195A0A1B0GUA6 201 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 ARHGEF37A1IGU5 675 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 FAM86C2PA6NEL3 165 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 MEFVO15553 781 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 ZMYND10O75800 440 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 RPL17P18621 184 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 TKTP29401 623 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 HOXA9P31269 272 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 TNFSF9P41273 254 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 KRT85P78386 507 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 DNM1Q05193 864 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 PKP1Q13835 747 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 FOXD4L6Q3SYB3 417 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 CD300LGQ6UXG3 332 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 FOXD4L3Q6VB84 417 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 GLYCTKQ8IVS8 523 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 SYCP3Q8IZU3 236 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 BEST2Q8NFU1 509 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 POMGNT1Q8WZA1 660 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 SMG7Q92540 1137 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 OXCT2Q9BYC2 517 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 TRIM9Q9C026 710 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 PIDD1Q9HB75 910 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 TUBGCP4Q9UGJ1 667 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 RCOR1Q9UKL0 485 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 PCDHA7Q9UN72 937 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 C2CD2Q9Y426 696 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 WDFY4Q6ZS81 3184 aa19.28■□□□□ 0.68
SHKBP1-204ENST00000594862 LACTBL1A8MY62 500 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 KIAA0391O15091 583 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 IL18RAPO95256 599 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 LDHAP00338 332 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 POU2F2P09086 479 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 WEE2P0C1S8 567 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 BRCC3P46736 316 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 ZBTB6Q15916 424 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 PTPN21Q16825 1174 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 UVSSAQ2YD98 709 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 RESP18Q5W5W9 173 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 NT5DC4Q86YG4 428 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 EDAQ92838 391 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms