RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GPR179Q6PRD1 2367 aa16.16■□□□□ 0.18
PNKP-202ENST00000593706 TSC2P49815 1807 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 SMIM28A0A1B0GU29 152 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 RHOP08100 348 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 CD72P21854 359 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 IGFBP6P24592 240 aaPredicted RBP16.15■□□□□ 0.18
PNKP-202ENST00000593706 GRM5P41594 1212 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 ARPP19P56211 112 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 PEX3P56589 373 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 ROR1Q01973 937 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 ECM1Q16610 540 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 TPRG1Q6ZUI0 275 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 MCRS1Q96EZ8 462 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 DDX23Q9BUQ8 820 aaKnown RBP16.15■□□□□ 0.18
PNKP-202ENST00000593706 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
PNKP-202ENST00000593706 CDT1Q9H211 546 aa16.15■□□□□ 0.18
PNKP-202ENST00000593706 NCOR2Q9Y618 2525 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 SPTBN2O15020 2390 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 FAM170BA6NMN3 283 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 PODXLO00592 558 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
PNKP-202ENST00000593706 MAGEA9P43362 315 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 NPTX2P47972 431 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
PNKP-202ENST00000593706 SLC5A9Q2M3M2 681 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 VARS2Q5ST30 1063 aaKnown RBP16.14■□□□□ 0.17
PNKP-202ENST00000593706 DRC1Q96MC2 740 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 ACO2Q99798 780 aaKnown RBP16.14■□□□□ 0.17
PNKP-202ENST00000593706 CORO1BQ9BR76 489 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 LTB4R2Q9NPC1 389 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 GDE1Q9NZC3 331 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 FBXO4Q9UKT5 387 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 MTF2Q9Y483 593 aaPredicted RBP16.14■□□□□ 0.17
PNKP-202ENST00000593706 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
PNKP-202ENST00000593706 WDR27A2RRH5 827 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 HIP1RO75146 1068 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 ECI2O75521 394 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 CEBPBP17676 345 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 PTPN2P17706 415 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 GJB2P29033 226 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 ZNF528Q3MIS6 628 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 SLC8B1Q6J4K2 584 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 MAML2Q8IZL2 1156 aaPredicted RBP16.13■□□□□ 0.17
PNKP-202ENST00000593706 ZNF461Q8TAF7 563 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 RMDN1Q96DB5 314 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 OSBPL6Q9BZF3 934 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 CYP4F11Q9HBI6 524 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 NCDNQ9UBB6 729 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 DNM3Q9UQ16 869 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 DENND4CQ5VZ89 1909 aa16.13■□□□□ 0.17
PNKP-202ENST00000593706 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 E9PMD0 336 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 H7C4K7 107 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 SYN3O14994 580 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 SPTLC1O15269 473 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 NCAM2O15394 837 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 MCF2P10911 925 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 CSTF1Q05048 431 aaKnown RBP16.12■□□□□ 0.17
PNKP-202ENST00000593706 CUL4AQ13619 759 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 DGLUCYQ7Z3D6 616 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 ELMOD1Q8N336 334 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 ACAP3Q96P50 834 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 HEBP1Q9NRV9 189 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 MRPS17Q9Y2R5 130 aaKnown RBP16.12■□□□□ 0.17
PNKP-202ENST00000593706 INSL5Q9Y5Q6 135 aa16.12■□□□□ 0.17
PNKP-202ENST00000593706 ABLIM3O94929 683 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ATF2P15336 505 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 TARSP26639 723 aaKnown RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 MCM4P33991 863 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 STRN3Q13033 797 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 PTGDRQ13258 359 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 PDIA5Q14554 519 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 CTXN3Q4LDR2 81 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ZNF280DQ6N043 979 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ALKAL1Q6UXT8 129 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ZNF852Q6ZMS4 543 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 PDZD4Q76G19 769 aaPredicted RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 DCLK2Q8N568 766 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 IGSF22Q8N9C0 903 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 DNASE1L2Q92874 299 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ELSPBP1Q96BH3 223 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 ZMAT2Q96NC0 199 aaKnown RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 RUSC1Q9BVN2 902 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 TARS2Q9BW92 718 aaKnown RBP16.11■□□□□ 0.17
PNKP-202ENST00000593706 PLA2G2FQ9BZM2 168 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 TMEM134Q9H6X4 195 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 BRD9Q9H8M2 597 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 PTPRHQ9HD43 1115 aa16.11■□□□□ 0.17
PNKP-202ENST00000593706 AVENQ9NQS1 362 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms