RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 PHTF1Q9UMS5 762 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SHOC2Q9UQ13 582 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 APOBEC2Q9Y235 224 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 NEU2Q9Y3R4 380 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 STRCP1A6NGW2 1772 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MYH3P11055 1940 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ADGRA3Q8IWK6 1321 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L15C9J2P7 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L13C9JLJ4 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L11C9JVI0 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L18D6R9N7 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L22D6RA61 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L17D6RBQ6 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L19D6RCP7 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L20D6RJB6 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TXNDC9O14530 226 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 RIMBP2O15034 1052 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PPIP5K2O43314 1243 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CYP3A4P08684 503 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 AKR1B1P15121 316 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PGM1P36871 562 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 GCLMP48507 274 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HSPA13P48723 471 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CTCFP49711 727 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC12A3P55017 1021 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L24Q0WX57 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KRT81Q14533 505 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 LRRC14Q15048 493 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TRMT5Q32P41 509 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 EAPPQ56P03 285 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 INTS5Q6P9B9 1019 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 TMEM154Q6P9G4 183 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L6PQ6QN14 398 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 GPD1LQ8N335 351 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 RAB3IL1Q8TBN0 382 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 EPS8L3Q8TE67 593 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ATP8B4Q8TF62 1192 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 JADE3Q92613 823 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CRAMP1Q96RY5 1269 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KCNMB3Q9NPA1 279 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ANKEF1Q9NU02 776 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CYP39A1Q9NYL5 469 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HSPBP1Q9NZL4 362 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HACD3Q9P035 362 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZNF212Q9UDV6 495 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZBTB21Q9ULJ3 1066 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC12A4Q9UP95 1085 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TRIM33Q9UPN9 1127 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SORCS3Q9UPU3 1222 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 C10orf71Q711Q0 1435 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PLIN4Q96Q06 1357 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 FRMPD4Q14CM0 1322 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 ZNF335Q9H4Z2 1342 aaPredicted RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 A0A0G2JND7 137 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 ZSCAN5CA6NGD5 496 aaPredicted RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 M0R2N6 131 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 CLDN3O15551 220 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TOM1O60784 492 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 LGR5O75473 907 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TCEA3O75764 348 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 AKAP3O75969 853 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 MTA2O94776 668 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PSAPP07602 524 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 ALADP13716 330 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 SERPINB6P35237 376 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 RPL21P46778 160 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 PAPOLAP51003 745 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 ARSEP51690 589 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 SLC18A1P54219 525 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PSMC5P62195 406 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 ESRRGP62508 458 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PDIA2Q13087 525 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 GPS1Q13098 491 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TCEAL1Q15170 157 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 FAM47CQ5HY64 1035 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 HAUS6Q7Z4H7 955 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 CCDC125Q86Z20 511 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PPIL6Q8IXY8 311 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 GMCL1P1Q8NEA9 526 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 RNF217Q8TC41 542 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 C1orf54Q8WWF1 131 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 KAT2BQ92831 832 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 GLG1Q92896 1179 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 C18orf8Q96DM3 657 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 MTBPQ96DY7 904 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 CMTM5Q96DZ9 223 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 SLX1AQ9BQ83 275 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 LXNQ9BS40 222 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 MMTAG2Q9BU76 263 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 NUF2Q9BZD4 464 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 PCIF1Q9H4Z3 704 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 SSU72Q9NP77 194 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 NRBP2Q9NSY0 501 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 CCPG1Q9ULG6 757 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 KPNA7A9QM74 516 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TLR3O15455 904 aaKnown RBP3.73□□□□□ -1.81
VMP1-216ENST00000592790 CYTH3O43739 400 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 MED24O75448 989 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TRIM49P0CI25 452 aa3.73□□□□□ -1.81
VMP1-216ENST00000592790 TRIM49CP0CI26 452 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms