RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SLC13A4Q9UKG4 626 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 H3BRJ5 948 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 NKRFO15226 690 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 CASP1P29466 404 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 NME3Q13232 169 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 STAT4Q14765 748 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 EFHBQ8N7U6 833 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 TMX2Q9Y320 296 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 SNX5Q9Y5X3 404 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 BCL9O00512 1426 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 TMEM247A6NEH6 219 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 PDHXO00330 501 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 DRAP1Q14919 205 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 MAPRE2Q15555 327 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 ZNF484Q5JVG2 852 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 PPCSQ9HAB8 311 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 LIMA1Q9UHB6 759 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 ITIH6Q6UXX5 1313 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 TRIM49P0CI25 452 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 TRIM49CP0CI26 452 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 GYS2P54840 703 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 BTBD6Q96KE9 485 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 HSPBP1Q9NZL4 362 aa14.04□□□□□ -0.16
SMARCA4-216ENST00000591545 SEPT8Q92599 483 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 STAMBPL1Q96FJ0 436 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 NLRP11P59045 1033 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 LRRC71Q8N4P6 559 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ZC3H4Q9UPT8 1303 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 STRNO43815 780 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 AGTP01019 485 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 INHBEP58166 350 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 BYSLQ13895 437 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ECT2Q9H8V3 914 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ABCF3Q9NUQ8 709 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 ZFXP17010 805 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 VCAM1P19320 739 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 GRAMD4Q6IC98 578 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 PGBD3Q8N328 593 aa14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 SCHIP1Q9P0W5 487 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-216ENST00000591545 HSPA9P38646 679 aaKnown RBP14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 SLC1A1P43005 524 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ALDH1A3P47895 512 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ACTR2P61160 394 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ARHGAP15Q53QZ3 475 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 TRIM59Q8IWR1 403 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 MTBPQ96DY7 904 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 HEY1Q9Y5J3 304 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 SLC16A3O15427 465 aaKnown RBP14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ACOT2P49753 483 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 HSD17B4P51659 736 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 SEPT5Q99719 369 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 EPAS1Q99814 870 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 WWP1Q9H0M0 922 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ING2Q9H160 280 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 ATP11BQ9Y2G3 1177 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 IGSF9BQ9UPX0 1349 aa14.02□□□□□ -0.16
SMARCA4-216ENST00000591545 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 HERVK_113P62684 666 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 ZNF235Q14590 738 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 DCAF4L1Q3SXM0 396 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 SPATA4Q8NEY3 305 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 TTC8Q8TAM2 541 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 H0Y3Z8 333 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 KRT14P02533 472 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 PRR29P0C7W0 189 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 LCP1P13796 627 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 YY1P25490 414 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 PCSK1NQ9UHG2 260 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 SMG5Q9UPR3 1016 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 FAM205AQ6ZU69 1335 aa14.02□□□□□ -0.17
SMARCA4-216ENST00000591545 HDAC4P56524 1084 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 CACNB2Q08289 660 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 MGAT5BQ3V5L5 792 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 CCDC137Q6PK04 289 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 LCA5Q86VQ0 697 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SNX12Q9UMY4 172 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SH3BP1Q9Y3L3 701 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 PPP1R37O75864 691 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 PNPLA4P41247 253 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms