RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 KCNH3Q9ULD8 1083 aa23.81■■□□□ 1.4
DDX39A-215ENST00000590696 MRPS23Q9Y3D9 190 aaKnown RBP23.81■■□□□ 1.4
DDX39A-215ENST00000590696 NUB1Q9Y5A7 615 aa23.81■■□□□ 1.4
DDX39A-215ENST00000590696 MEFVO15553 781 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-215ENST00000590696 PLS3P13797 630 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 ELF1P32519 619 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 RPL9P32969 192 aaKnown RBP23.8■■□□□ 1.4
DDX39A-215ENST00000590696 SMTNP53814 917 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 ARPP19P56211 112 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 STARD6P59095 220 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 SNW1Q13573 536 aaKnown RBP23.8■■□□□ 1.4
DDX39A-215ENST00000590696 RABEP1Q15276 862 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 SEZ6Q53EL9 994 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 ING5Q8WYH8 240 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 SHDQ96IW2 340 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 NOTCH4Q99466 2003 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 KXD1Q9BQD3 176 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 FOXQ1Q9C009 403 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 ANKFY1Q9P2R3 1169 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 KCNG1Q9UIX4 513 aa23.8■■□□□ 1.4
DDX39A-215ENST00000590696 WDR27A2RRH5 827 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 VWA3AA6NCI4 1184 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 SYN3O14994 580 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 TOM1L1O75674 476 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 ABLIM3O94929 683 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 LRG1P02750 347 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 RHOP08100 348 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 ADSSL1Q8N142 457 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 KCTD17Q8N5Z5 321 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 TMEM161BQ8NDZ6 487 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 PJA1Q8NG27 643 aa23.79■■□□□ 1.4
DDX39A-215ENST00000590696 CITO14578 2027 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 H7C4K7 107 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 PRRG1O14668 218 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 TBC1D4O60343 1298 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 MAPTP10636 758 aaKnown RBP23.78■■□□□ 1.4
DDX39A-215ENST00000590696 PTPN2P17706 415 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 SLC12A3P55017 1021 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 MRPL58Q14197 206 aaKnown RBP23.78■■□□□ 1.4
DDX39A-215ENST00000590696 NOLC1Q14978 699 aaKnown RBP eCLIP23.78■■□□□ 1.4
DDX39A-215ENST00000590696 SLC5A9Q2M3M2 681 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 SLC10A6Q3KNW5 377 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 MCRS1Q96EZ8 462 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 CDK5RAP3Q96JB5 506 aa23.78■■□□□ 1.4
DDX39A-215ENST00000590696 ARHGEF37A1IGU5 675 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 H3BQV1 296 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 LRRN2O75325 713 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 PLA2G4BP0C869 781 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 GLULP15104 373 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 ATF2P15336 505 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 GJB2P29033 226 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 SLC44A4Q53GD3 710 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 TMX3Q96JJ7 454 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 SUSD3Q96L08 255 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 CYP4F11Q9HBI6 524 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 AVENQ9NQS1 362 aaPredicted RBP23.77■■□□□ 1.4
DDX39A-215ENST00000590696 FBXL5Q9UKA1 691 aa23.77■■□□□ 1.4
DDX39A-215ENST00000590696 NPHP3-ACAD11A0A0J9YXS1 232 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 KANSL1LA0AUZ9 987 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 CLDN3O15551 220 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 SEC24AO95486 1093 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 MCM4P33991 863 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 MATR3P43243 847 aaKnown RBP eCLIP23.76■■□□□ 1.39
DDX39A-215ENST00000590696 CACNB1Q02641 598 aaPredicted RBP23.76■■□□□ 1.39
DDX39A-215ENST00000590696 MLF2Q15773 248 aaPredicted RBP23.76■■□□□ 1.39
DDX39A-215ENST00000590696 CTXN3Q4LDR2 81 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 ZPBP2Q6X784 338 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 C1orf210Q8IVY1 113 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 TCEAL8Q8IYN2 117 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 GDE1Q9NZC3 331 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 KCND2Q9NZV8 630 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 R4GN57 208 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 MYH11P35749 1972 aa23.76■■□□□ 1.39
DDX39A-215ENST00000590696 CEBPBP17676 345 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 PFKPQ01813 784 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 PRKCQQ04759 706 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 MCL1Q07820 350 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 TMEM119Q4V9L6 283 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 ARL6IP4Q66PJ3 421 aaKnown RBP23.75■■□□□ 1.39
DDX39A-215ENST00000590696 POTEHQ6S545 545 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 TBC1D32Q96NH3 1257 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 CORO1BQ9BR76 489 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 DDX23Q9BUQ8 820 aaKnown RBP23.75■■□□□ 1.39
DDX39A-215ENST00000590696 PLA2G2FQ9BZM2 168 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 HAPLN2Q9GZV7 340 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 TUBGCP4Q9UGJ1 667 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 COL4A3Q01955 1670 aa23.75■■□□□ 1.39
DDX39A-215ENST00000590696 ECI2O75521 394 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 CXCL8P10145 99 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 SPAG1Q07617 926 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 ARSHQ5FYA8 562 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 TPGS2Q68CL5 300 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 ZNF280DQ6N043 979 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 APPL2Q8NEU8 664 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 KCNG4Q8TDN1 519 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 DDX12PQ92771 950 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 SEMA4AQ9H3S1 761 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 LARSQ9P2J5 1176 aaKnown RBP23.74■■□□□ 1.39
DDX39A-215ENST00000590696 INSL5Q9Y5Q6 135 aa23.74■■□□□ 1.39
DDX39A-215ENST00000590696 PTPRZ1P23471 2315 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms