RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LPAR1Q92633 364 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 NUDCD1Q96RS6 583 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 KCTD10Q9H3F6 313 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 BCAP29Q9UHQ4 241 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 SCOCQ9UIL1 159 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 GZMAP12544 262 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PRKCEQ02156 737 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 DUOXA2Q1HG44 320 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PPP2R5CQ13362 524 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 RASIP1Q5U651 963 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 RSBN1LQ6PCB5 846 aaPredicted RBP18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 RAPH1Q70E73 1250 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 ERP27Q96DN0 273 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 ANGPTL2Q9UKU9 493 aa18.11■□□□□ 0.49
SMARCA4-215ENST00000590574 PDHA1P08559 390 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 PRKCIP41743 596 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 EMC2Q15006 297 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 TRADDQ15628 312 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 CD302Q8IX05 232 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 TOPORSQ9NS56 1045 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ANKEF1Q9NU02 776 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ASTN1O14525 1302 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 EXTL3O43909 919 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 DIAPH2O60879 1101 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 KRT3P12035 628 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 RPL21P46778 160 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 SUPT20HL1Q3ZLR7 823 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 APOBEC3HQ6NTF7 200 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 C1orf228Q6PIY5 440 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ZNF677Q86XU0 584 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 GABPB2Q8TAK5 448 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 PURBQ96QR8 312 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 NOD2Q9HC29 1040 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 NPHS2Q9NP85 383 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 SMYD2Q9NRG4 433 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 KIAA0391O15091 583 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ICAM1P05362 532 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 RPS6P62753 249 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 IFRD2Q12894 506 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 RAB3IL1Q8TBN0 382 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 WHRNQ9P202 907 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 EIF3EP60228 445 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 ANKRD20A8PQ5CZ79 823 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 FAM102AQ5T9C2 384 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 DNAAF3Q8N9W5 541 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 SNX25Q9H3E2 840 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 PSMC3IPQ9P2W1 217 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
SMARCA4-215ENST00000590574 KRT38O76015 456 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 NCF2P19878 526 aaPredicted RBP18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 AP3M2P53677 418 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 MREGQ8N565 214 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 TAS2R14Q9NYV8 317 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 HMGCS2P54868 508 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 NOP14P78316 857 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 CYTH2Q99418 400 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 SLC13A1Q9BZW2 595 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 USH1CQ9Y6N9 552 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 SPECC1L-ADORA2AF8WAN1 911 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 TAS1R2Q8TE23 839 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 ACSF2Q96CM8 615 aaPredicted RBP18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 KDM4CQ9H3R0 1056 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 CYP26B1Q9NR63 512 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 SPATS2LQ9NUQ6 558 aaKnown RBP18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 BTNL10A8MVZ5 291 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 COPS2P61201 443 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 MTM1Q13496 603 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 HGSNATQ68CP4 663 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 AADACL2Q6P093 401 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 SULF1Q8IWU6 871 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 LNX1Q8TBB1 728 aaPredicted RBP18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 ELMO3Q96BJ8 720 aa18.09■□□□□ 0.49
SMARCA4-215ENST00000590574 MEIS2O14770 477 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 RIPK2O43353 540 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 FDX1P10109 184 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 PYGMP11217 842 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 ELF1P32519 619 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 CDH6P55285 790 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 FEZF2Q8TBJ5 459 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 TRIM4Q9C037 500 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 SALL4Q9UJQ4 1053 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 SSX2IPQ9Y2D8 614 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 RBAK-RBAKDNI3L0D1 243 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 NPTX2P47972 431 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 BTNL9Q6UXG8 535 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 DCPSQ96C86 337 aaKnown RBP18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 SHISA4Q96DD7 197 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 INPP4AQ96PE3 977 aaPredicted RBP18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 CXorf56Q9H5V9 222 aa18.08■□□□□ 0.49
SMARCA4-215ENST00000590574 STOML1Q9UBI4 398 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms