RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 IL9P15248 144 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 TXLNAP40222 546 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 GRM5P41594 1212 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 KCNMA1Q12791 1236 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 AXDND1Q5T1B0 1012 aaPredicted RBP12.28□□□□□ -0.44
SMAD4-211ENST00000590499 RRAGBQ5VZM2 374 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 MPZL3Q6UWV2 235 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 TMEM184AQ6ZMB5 413 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 CEP120Q8N960 986 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 UHRF1Q96T88 793 aaPredicted RBP12.28□□□□□ -0.44
SMAD4-211ENST00000590499 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 STK39Q9UEW8 545 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
SMAD4-211ENST00000590499 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
SMAD4-211ENST00000590499 MYMKA6NI61 221 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 H0YCG3 227 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 MEFVO15553 781 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 CLASP2O75122 1294 aaKnown RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 PIGRP01833 764 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 MCF2P10911 925 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 SCP2P22307 547 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 OR1G1P47890 313 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 NDUFV1P49821 464 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 STRN3Q13033 797 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 COASYQ13057 564 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 TUSC3Q13454 348 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 ATL3Q6DD88 541 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 ALKAL1Q6UXT8 129 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 EP400NLQ6ZTU2 488 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 APBB1IPQ7Z5R6 666 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 MYCT1Q8N699 235 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 SMRP1Q8NCR6 262 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 ZBTB45Q96K62 511 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 RPS6KC1Q96S38 1066 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 PAAF1Q9BRP4 392 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 HERC2P3Q9BVR0 1158 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 HAPLN2Q9GZV7 340 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 CACNG4Q9UBN1 327 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 CD207Q9UJ71 328 aa12.27□□□□□ -0.45
SMAD4-211ENST00000590499 BARX2Q9UMQ3 279 aaPredicted RBP12.27□□□□□ -0.45
SMAD4-211ENST00000590499 PLXNA3P51805 1871 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 FRMD3A2A2Y4 597 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 K7ENM7 598 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 MBTPS2O43462 519 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 TRAK2O60296 914 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 CUTAO60888 179 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 TBCAO75347 108 aaKnown RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 CXCL14O95715 111 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 SOD2P04179 222 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 THP07101 528 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 STAT6P42226 847 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 GTF2BQ00403 316 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 MCL1Q07820 350 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 SMAD4Q13485 552 aaKnown RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 NOLC1Q14978 699 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 CLUL1Q15846 466 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 FOXD4L6Q3SYB3 417 aaPredicted RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 FOXD4L3Q6VB84 417 aaPredicted RBP12.26□□□□□ -0.45
SMAD4-211ENST00000590499 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 FAM178BQ8IXR5 827 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 KCNG4Q8TDN1 519 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 FOXJ1Q92949 421 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 SNX27Q96L92 541 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 ST6GALNAC4Q9H4F1 302 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 TBX20Q9UMR3 447 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 HCFC2Q9Y5Z7 792 aa12.26□□□□□ -0.45
SMAD4-211ENST00000590499 ANK1P16157 1881 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 FAM189A1O60320 539 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 KCNE1P15382 129 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 NMT1P30419 496 aaKnown RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SMAD2Q15796 467 aaKnown RBP12.25□□□□□ -0.45
SMAD4-211ENST00000590499 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 FUT10Q6P4F1 479 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SLC39A4Q6P5W5 647 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SYCE2Q6PIF2 218 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 DYMQ7RTS9 669 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 TAS1R1Q7RTX1 841 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 SFR1Q86XK3 245 aa12.25□□□□□ -0.45
SMAD4-211ENST00000590499 MAP4K3Q8IVH8 894 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms