RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SPAG1Q07617 926 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 MCL1Q07820 350 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 STRN3Q13033 797 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 MRPL58Q14197 206 aaKnown RBP19.69■□□□□ 0.74
H3F3B-209ENST00000589949 NOLC1Q14978 699 aaKnown RBP eCLIP19.69■□□□□ 0.747e-17■□□□□ 11.2
H3F3B-209ENST00000589949 ZBTB41Q5SVQ8 909 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 LARP1BQ659C4 914 aaKnown RBP19.69■□□□□ 0.74
H3F3B-209ENST00000589949 SLC8B1Q6J4K2 584 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 CCDC105Q8IYK2 499 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 REEP2Q9BRK0 252 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 CITO14578 2027 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 WDR27A2RRH5 827 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 TRAPPC3O43617 180 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 GFRA3O60609 400 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 ABLIM3O94929 683 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 SEC24AO95486 1093 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 POU2F2P09086 479 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 CXCL8P10145 99 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 TNFSF9P41273 254 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 GPC5P78333 572 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 DHX8Q14562 1220 aaKnown RBP19.68■□□□□ 0.74
H3F3B-209ENST00000589949 SLC5A9Q2M3M2 681 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 UVSSAQ2YD98 709 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 ZPBP2Q6X784 338 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 ASCL5Q7RTU5 278 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 NPAS3Q8IXF0 933 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 KCTD17Q8N5Z5 321 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 ING5Q8WYH8 240 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 CDK5RAP3Q96JB5 506 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 TBC1D17Q9HA65 648 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 MYH11P35749 1972 aa19.68■□□□□ 0.74
H3F3B-209ENST00000589949 PDCD11Q14690 1871 aaKnown RBP19.67■□□□□ 0.74
H3F3B-209ENST00000589949 PROB1E7EW31 1015 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 FAM189A1O60320 539 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 XYLBO75191 536 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 RPL9P32969 192 aaKnown RBP19.67■□□□□ 0.74
H3F3B-209ENST00000589949 NBL1P41271 181 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 SMTNP53814 917 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 MCM6Q14566 821 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 KARSQ15046 597 aaKnown RBP19.67■□□□□ 0.74
H3F3B-209ENST00000589949 HAUS6Q7Z4H7 955 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 GPBP1Q86WP2 473 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 DTWD2Q8NBA8 298 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 ZNF461Q8TAF7 563 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 SUSD3Q96L08 255 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 IRF2BPLQ9H1B7 796 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 SLC2A4RGQ9NR83 387 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 KCND2Q9NZV8 630 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 FBXL5Q9UKA1 691 aa19.67■□□□□ 0.74
H3F3B-209ENST00000589949 ZFP37Q9Y6Q3 630 aaPredicted RBP19.67■□□□□ 0.74
H3F3B-209ENST00000589949 TTC26A0AVF1 554 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 CLDN3O15551 220 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 PLCG1P19174 1290 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 MCM2P49736 904 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 ZNF131P52739 623 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 ARPP19P56211 112 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 ZBTB6Q15916 424 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 PABPC1LQ4VXU2 614 aaKnown RBP19.66■□□□□ 0.74
H3F3B-209ENST00000589949 SLC39A4Q6P5W5 647 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 USP49Q70CQ1 688 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 FRMD5Q7Z6J6 570 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 KCNN1Q92952 543 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 AK8Q96MA6 479 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 FIZ1Q96SL8 496 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 KXD1Q9BQD3 176 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 RTP3Q9BQQ7 232 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 MYH15Q9Y2K3 1946 aa19.66■□□□□ 0.74
H3F3B-209ENST00000589949 ARHGEF37A1IGU5 675 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 SYN3O14994 580 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 RHOP08100 348 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 UBA7P41226 1012 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 GUCY2FP51841 1108 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 CUL4AQ13619 759 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 ANGPT1Q15389 498 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 SF3A1Q15459 793 aaKnown RBP19.65■□□□□ 0.74
H3F3B-209ENST00000589949 ARHGEF3Q9NR81 526 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 DLGAP2Q9P1A6 1054 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 LARSQ9P2J5 1176 aaKnown RBP19.65■□□□□ 0.74
H3F3B-209ENST00000589949 ODF2LQ9ULJ1 636 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.65■□□□□ 0.74
H3F3B-209ENST00000589949 NUB1Q9Y5A7 615 aa19.65■□□□□ 0.74
H3F3B-209ENST00000589949 DMDP11532 3685 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 LACTBL1A8MY62 500 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 STK25O00506 426 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 LRRN2O75325 713 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 DCNP07585 359 aaKnown RBP19.64■□□□□ 0.73
H3F3B-209ENST00000589949 CLTAP09496 248 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 GLULP15104 373 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 ATF2P15336 505 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 MCM4P33991 863 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 ENOX2Q16206 610 aaKnown RBP19.64■□□□□ 0.73
H3F3B-209ENST00000589949 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 RTL10Q7L3V2 364 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 RAD54LQ92698 747 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 DDX12PQ92771 950 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 TCEAL4Q96EI5 215 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 PLA2G2FQ9BZM2 168 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 FOXQ1Q9C009 403 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 IKZF4Q9H2S9 585 aa19.64■□□□□ 0.73
H3F3B-209ENST00000589949 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms