RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 CD8BP10966 210 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 OSMP13725 252 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 IL6STP40189 918 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 CD151P48509 253 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 HK2P52789 917 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 RWDD2BP57060 319 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 CYP4F8P98187 520 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 TNIP1Q15025 636 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 PDCD2Q16342 344 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 DNAJC21Q5F1R6 531 aaKnown RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 NKAPLQ5M9Q1 402 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 BICRALQ6AI39 1079 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 TTLL5Q6EMB2 1281 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 ERC1Q8IUD2 1116 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 MIER2Q8N344 545 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 OXR1Q8N573 874 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 C7orf31Q8N865 590 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 NETO2Q8NC67 525 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 BCL7CQ8WUZ0 217 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 EXOC4Q96A65 974 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 TTC17Q96AE7 1141 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 AP5M1Q9H0R1 490 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 VPS33BQ9H267 617 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 MAN1C1Q9NR34 630 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 C1orf112Q9NSG2 853 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 ETAA1Q9NY74 926 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 PTPN22Q9Y2R2 807 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 LRRFIP2Q9Y608 721 aaKnown RBP6.53□□□□□ -1.36
SMAD4-208ENST00000589706 KIF20BQ96Q89 1820 aa6.53□□□□□ -1.36
SMAD4-208ENST00000589706 TCRBV5S2A0A599 114 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 UBA6A0AVT1 1052 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 ACOT7O00154 380 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 CTNND1O60716 968 aaKnown RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 TGFB1P01137 390 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 TUBB4AP04350 444 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 ITGB2P05107 769 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 C5AR1P21730 350 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 MAGEA8P43361 318 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 HERVK_113P62684 666 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 PICALMQ13492 652 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 PLA2G4EQ3MJ16 856 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 TBC1D10BQ4KMP7 808 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 COBLL1Q53SF7 1204 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 IL31Q6EBC2 164 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 KCNK18Q7Z418 384 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 MILR1Q7Z6M3 343 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 SIRT2Q8IXJ6 389 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 TMTC2Q8N394 836 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 SLC2A13Q96QE2 648 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 SH3GL3Q99963 347 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 ARGLU1Q9NWB6 273 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 PALD1Q9ULE6 856 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 EDARQ9UNE0 448 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 STXBP5LQ9Y2K9 1186 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 SIT1Q9Y3P8 196 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 HTTP42858 3142 aa6.52□□□□□ -1.37
SMAD4-208ENST00000589706 RANBP2P49792 3224 aaKnown RBP6.52□□□□□ -1.37
SMAD4-208ENST00000589706 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 PRSS38A1L453 326 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 FITM1A5D6W6 292 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 ELL2O00472 640 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 RNMTO43148 476 aaKnown RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 A1BGP04217 495 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 MMEP08473 750 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 POU2F2P09086 479 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 IFIT2P09913 472 aaKnown RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 MTHFD2P13995 350 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 ACTN2P35609 894 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 NEK3P51956 506 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 GRIN1Q05586 938 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 ZNF267Q14586 743 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CRYMQ14894 314 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 SAFBQ15424 915 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 NR0B2Q15466 257 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 ZRSR2Q15696 482 aaKnown RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CDC37Q16543 378 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 LONRF3Q496Y0 759 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CRY2Q49AN0 593 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 PITRM1Q5JRX3 1037 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 TTC38Q5R3I4 469 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 TIGD7Q6NT04 549 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CCDC62Q6P9F0 684 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CLEC4GQ6UXB4 293 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 LEKR1Q6ZMV7 388 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 SPRED2Q7Z698 418 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 DEFB123Q8N688 67 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 ASB15Q8WXK1 588 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 E2F7Q96AV8 911 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CDCA5Q96FF9 252 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 CCDC120Q96HB5 630 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 RAX2Q96IS3 184 aa6.51□□□□□ -1.37
SMAD4-208ENST00000589706 TAAR9Q96RI9 348 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms