RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TULP1	O00294	542 aa	Predicted RBP	16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	MYL3	P08590	195 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	TNNI1	P19237	187 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	HOXC8	P31273	242 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	SP3	Q02447	781 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	KIF22	Q14807	665 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZNF568	Q3ZCX4	644 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	MFSD14C	Q5VZR4	134 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	CNPY4	Q8N129	248 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	OR5B17	Q8NGF7	314 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ELMO3	Q96BJ8	720 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ADAMTS10	Q9H324	1103 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	SUFU	Q9UMX1	484 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	MYH10	P35580	1976 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	GPR25	O00155	361 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZEB2	O60315	1214 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ANXA13	P27216	316 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	HNRNPH1	P31943	449 aa	Known RBP	16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	APLP1	P51693	650 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	GJA9	P57773	515 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	KIF5A	Q12840	1032 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	RUFY4	Q6ZNE9	571 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZNF410	Q86VK4	478 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	NLRP7	Q8WX94	980 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	TATDN2	Q93075	761 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	RPGRIP1	Q96KN7	1286 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	PI4K2A	Q9BTU6	479 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	RNF186	Q9NXI6	227 aa		16.55	■□□□□ 0.24
DDX39A-209	ENST00000589318	DNAH12	Q6ZR08	3092 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	SMIM35	A0A1B0GVV1	85 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	TMCO5B	A8MYB1	307 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	DDX3X	O00571	662 aa	Known RBP eCLIP	16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	GPR32	O75388	356 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	HLA-DRA	P01903	254 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	ARF4	P18085	180 aa	Predicted RBP	16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	CACNB2	Q08289	660 aa	Predicted RBP	16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	SCARA3	Q6AZY7	606 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	PPM1K	Q8N3J5	372 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	SLC30A5	Q8TAD4	765 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	SHC3	Q92529	594 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	VTI1A	Q96AJ9	217 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	NT5C1B	Q96P26	610 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	TSGA10	Q9BZW7	698 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	UPF3A	Q9H1J1	476 aa	Known RBP	16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	PDZD7	Q9H5P4	517 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	SALL4	Q9UJQ4	1053 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	NAGPA	Q9UK23	515 aa		16.54	■□□□□ 0.24
DDX39A-209	ENST00000589318	TARSL2	A2RTX5	802 aa	Known RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	MEFV	O15553	781 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	TSPAN1	O60635	241 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZC3H11A	O75152	810 aa	Known RBP eCLIP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	VSNL1	P62760	191 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	NKX3-2	P78367	333 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	ZNF200	P98182	395 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	KIZ	Q2M2Z5	673 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	WDR49	Q8IV35	697 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	FMNL3	Q8IVF7	1028 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	TMEM192	Q8IY95	271 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	THNSL1	Q8IYQ7	743 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	FAM71A	Q8IYT1	594 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	LNX1	Q8TBB1	728 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	CPB2	Q96IY4	423 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	NAPG	Q99747	312 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	FAM49A	Q9H0Q0	323 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	CDHR5	Q9HBB8	845 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	TREH	O43280	583 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	C6orf222	P0C671	652 aa	Predicted RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	CYP2C9	P11712	490 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	B4GALNT4	Q76KP1	1039 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	KATNAL1	Q9BW62	490 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	PACSIN1	Q9BY11	444 aa		16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	PUF60	Q9UHX1	559 aa	Known RBP	16.53	■□□□□ 0.24
DDX39A-209	ENST00000589318	MACROD2	A1Z1Q3	448 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	SEPT4	O43236	478 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	MFAP3	P55082	362 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	GCNT1	Q02742	428 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	TMEM62	Q0P6H9	643 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	NAB2	Q15742	525 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	FAM76A	Q8TAV0	307 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	HDAC6	Q9UBN7	1215 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	FAM169A	Q9Y6X4	670 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	THSD7B	Q9C0I4	1608 aa		16.52	■□□□□ 0.23
DDX39A-209	ENST00000589318	ATP8B3	O60423	1300 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	TRPA1	O75762	1119 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	SYF2	O95926	243 aa	Known RBP	16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	PGK1	P00558	417 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	MCF2	P10911	925 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	ELN	P15502	786 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	FGFR4	P22455	802 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	PIK3CA	P42336	1068 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	BIRC3	Q13489	604 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	TMEM132A	Q24JP5	1023 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	ALKBH5	Q6P6C2	394 aa	Known RBP	16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	GLYCTK	Q8IVS8	523 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	CABS1	Q96KC9	395 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	APOBEC3G	Q9HC16	384 aa	Known RBP	16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	CAPN6	Q9Y6Q1	641 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318	CIT	O14578	2027 aa		16.51	■□□□□ 0.23
DDX39A-209	ENST00000589318		A0A1B0GUA9	196 aa		16.51	■□□□□ 0.23

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