RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 MARCKSP29966 332 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-222ENST00000589235 MCM4P33991 863 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 TXLNAP40222 546 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 MRE11P49959 708 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 MCM6Q14566 821 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 VARS2Q5ST30 1063 aaKnown RBP23.2■■□□□ 1.3
CIRBP-222ENST00000589235 SLC44A3Q8N4M1 653 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 KRI1Q8N9T8 703 aaKnown RBP23.2■■□□□ 1.3
CIRBP-222ENST00000589235 FLCNQ8NFG4 579 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 ZNF461Q8TAF7 563 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 INTS4Q96HW7 963 aaKnown RBP23.2■■□□□ 1.3
CIRBP-222ENST00000589235 BLOC1S4Q9NUP1 217 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 WNT16Q9UBV4 365 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 ZNF131P52739 623 aa23.19■■□□□ 1.3
CIRBP-222ENST00000589235 PPP2R3AQ06190 1150 aa23.19■■□□□ 1.3
CIRBP-222ENST00000589235 SEZ6Q53EL9 994 aa23.19■■□□□ 1.3
CIRBP-222ENST00000589235 SLC8B1Q6J4K2 584 aa23.19■■□□□ 1.3
CIRBP-222ENST00000589235 C18orf25Q96B23 403 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-222ENST00000589235 CDH7Q9ULB5 785 aa23.19■■□□□ 1.3
CIRBP-222ENST00000589235 GALR2O43603 387 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-222ENST00000589235 SRFP11831 508 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 CYP3A5P20815 502 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 RFX1P22670 979 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 IGFBP6P24592 240 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-222ENST00000589235 GRIN1Q05586 938 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 TCF15Q12870 199 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 CD302Q8IX05 232 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 RSAD2Q8WXG1 361 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 KIF12Q96FN5 646 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 SUSD3Q96L08 255 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 RPF1Q9H9Y2 349 aaKnown RBP23.18■■□□□ 1.3
CIRBP-222ENST00000589235 UBQLN1Q9UMX0 589 aaKnown RBP23.18■■□□□ 1.3
CIRBP-222ENST00000589235 CLIC4Q9Y696 253 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 MUC6Q6W4X9 2439 aa23.18■■□□□ 1.3
CIRBP-222ENST00000589235 STK25O00506 426 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 PRRG1O14668 218 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 OGTO15294 1046 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 PIGRP01833 764 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 LRG1P02750 347 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 CXCL8P10145 99 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 SYT1P21579 422 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 CTXN3Q4LDR2 81 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 ZNF280DQ6N043 979 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 RSPO2Q6UXX9 243 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-222ENST00000589235 MTSS1LQ765P7 747 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 SIX5Q8N196 739 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 ATOH1Q92858 354 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-222ENST00000589235 RTP3Q9BQQ7 232 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 OXCT2Q9BYC2 517 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-222ENST00000589235 STK17AQ9UEE5 414 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 KCNH3Q9ULD8 1083 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 MAFFQ9ULX9 164 aa23.17■■□□□ 1.3
CIRBP-222ENST00000589235 SRPRBQ9Y5M8 271 aaKnown RBP23.17■■□□□ 1.3
CIRBP-222ENST00000589235 ANHXE9PGG2 379 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 CFHP08603 1231 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 ARPP19P56211 112 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 ROR1Q01973 937 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 PABPC1LQ4VXU2 614 aaKnown RBP23.16■■□□□ 1.3
CIRBP-222ENST00000589235 RRAGBQ5VZM2 374 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 TPGS2Q68CL5 300 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 SLFN12LQ6IEE8 588 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 TMEM105Q8N8V8 129 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 MSTO1Q9BUK6 570 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 BACH2Q9BYV9 841 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 ZSCAN16Q9H4T2 348 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-222ENST00000589235 PCDHB8Q9UN66 801 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 ZNF318Q5VUA4 2279 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 C2orf16Q68DN1 1984 aa23.16■■□□□ 1.3
CIRBP-222ENST00000589235 MTCL1Q9Y4B5 1905 aaKnown RBP23.16■■□□□ 1.3
CIRBP-222ENST00000589235 TTC26A0AVF1 554 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 NARSO43776 548 aaKnown RBP23.15■■□□□ 1.3
CIRBP-222ENST00000589235 ABLIM3O94929 683 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 ATF2P15336 505 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 PAX3P23760 479 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 LRPAP1P30533 357 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 GTF2BQ00403 316 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 MRPL58Q14197 206 aaKnown RBP23.15■■□□□ 1.3
CIRBP-222ENST00000589235 PTPAQ15257 358 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 DDX12PQ92771 950 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 EPSTI1Q96J88 318 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 TUBGCP4Q9UGJ1 667 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 FBXL5Q9UKA1 691 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 NUMBLQ9Y6R0 609 aa23.15■■□□□ 1.3
CIRBP-222ENST00000589235 MYO10Q9HD67 2058 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 PTPN2P17706 415 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 AOC1P19801 751 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 NTHL1P78549 312 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 RESTQ13127 1097 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 HTR4Q13639 388 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 SV2BQ7L1I2 683 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 MAP4K3Q8IVH8 894 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 ELMOD1Q8N336 334 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 BEST2Q8NFU1 509 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 FGF13Q92913 245 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 HAPLN2Q9GZV7 340 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 ST6GALNAC4Q9H4F1 302 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 CYP4F11Q9HBI6 524 aa23.14■■□□□ 1.29
CIRBP-222ENST00000589235 DNMT3BQ9UBC3 853 aaKnown RBP23.14■■□□□ 1.29
CIRBP-222ENST00000589235 FBXO2Q9UK22 296 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-222ENST00000589235 MRPS23Q9Y3D9 190 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms