RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 AGBL2Q5U5Z8 902 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 MIS18BP1Q6P0N0 1132 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF677Q86XU0 584 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 NT5DC4Q86YG4 428 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ARHGEF19Q8IW93 802 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 GPD1LQ8N335 351 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF511Q8NB15 262 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF280CQ8ND82 737 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ANKK1Q8NFD2 765 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 FNBP1Q96RU3 617 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 ZSWIM1Q9BR11 485 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 TSPAN10Q9H1Z9 355 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-206ENST00000589117 TMBIM4Q9HC24 238 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 HOXC10Q9NYD6 342 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 GABBR1Q9UBS5 961 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 GTF3C4Q9UKN8 822 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 MYH11P35749 1972 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 NFASCO94856 1347 aa7.93□□□□□ -1.14
ZNF540-206ENST00000589117 GPR182O15218 404 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CYP26A1O43174 497 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ATP9AO75110 1047 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 PHF2O75151 1096 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 LDHAP00338 332 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 MYBL1P10243 752 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ITGA4P13612 1032 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 MAGEA9P43362 315 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 RWDD2BP57060 319 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 GCNT1Q02742 428 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SLFN12LQ6IEE8 588 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SNRNP48Q6IEG0 339 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ANO5Q75V66 913 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TMC3Q7Z5M5 1100 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SCYL3Q8IZE3 742 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SLC20A1Q8WUM9 679 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 DHX38Q92620 1227 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 MAGOHBQ96A72 148 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ARHGEF26Q96DR7 871 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 FBXL18Q96ME1 805 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TEPSINQ96N21 525 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 STMN4Q9H169 189 aaPredicted RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 EPN3Q9H201 632 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ATP6V0A4Q9HBG4 840 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 GPRC5CQ9NQ84 441 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TAS2R14Q9NYV8 317 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TMOD4Q9NZQ9 345 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 GOLGA8IPA6NC78 632 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 GOLGA8JA6NMD2 632 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TISP43B9A030 160 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SGPL1O95470 568 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CCNE2O96020 404 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CYP1A2P05177 515 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 DLATP10515 647 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CYP11B1P15538 503 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 MAN1A1P33908 653 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 MDH1P40925 334 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CCT5P48643 541 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 LIG4P49917 911 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CORO7P57737 925 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CYP24A1Q07973 514 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SLMAPQ14BN4 828 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 UGCGQ16739 394 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SKIDA1Q1XH10 827 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 NBPF20Q3BBV1 942 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 XKR3Q5GH77 459 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 PLA2G4FQ68DD2 849 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 DUPD1Q68J44 220 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ACAD10Q6JQN1 1059 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SWSAP1Q6NVH7 229 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ARMC9Q7Z3E5 817 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 DDX42Q86XP3 938 aaKnown RBP eCLIP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CBWD2Q8IUF1 395 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 C10orf67Q8IYJ2 551 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CCDC105Q8IYK2 499 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 C3orf20Q8ND61 904 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF564Q8TBZ8 553 aaPredicted RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF653Q96CK0 615 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 NUP85Q9BW27 656 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TEX13BQ9BXU2 312 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 RBCK1Q9BYM8 510 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 DPH5Q9H2P9 285 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 CNOT10Q9H9A5 744 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 BCCIPQ9P287 314 aaKnown RBP eCLIP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SLC9A2Q9UBY0 812 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 PCYOX1Q9UHG3 505 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 NOCTQ9UK39 431 aaKnown RBP7.92□□□□□ -1.14
ZNF540-206ENST00000589117 PCDHB2Q9Y5E7 798 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 PCDHA3Q9Y5H8 950 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 SMCHD1A6NHR9 2005 aa7.92□□□□□ -1.14
ZNF540-206ENST00000589117 TMEM110-MUSTN1A8MSY1 372 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ATP2A1O14983 1001 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 KRT5P13647 590 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 NPR3P17342 541 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 COMTP21964 271 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ECHS1P30084 290 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ADSSP30520 456 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 LSP1P33241 339 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms