RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 GDI1P31150 447 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 CCR3P51677 355 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 ARPP19P56211 112 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 UPP1Q16831 310 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 SPAG17Q6Q759 2223 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 MAMSTRQ6ZN01 415 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 IRF7Q92985 503 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
IFT20-216ENST00000588477 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 SEMA4GQ9NTN9 838 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 CFAP47Q6ZTR5 3102 aa16.83■□□□□ 0.28
IFT20-216ENST00000588477 WDR27A2RRH5 827 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ACKR2O00590 384 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ZNF197O14709 1029 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ABLIM3O94929 683 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 KRT2P35908 639 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 CCR2P41597 374 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 VITQ6UXI7 678 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
IFT20-216ENST00000588477 MAP4K3Q8IVH8 894 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 UROC1Q96N76 676 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ASB16Q96NS5 453 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 IER2Q9BTL4 223 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 CCDC113Q9H0I3 377 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 CYP4F11Q9HBI6 524 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 PIAS3Q9Y6X2 628 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ZFHX4Q86UP3 3567 aa16.82■□□□□ 0.28
IFT20-216ENST00000588477 ATG2BQ96BY7 2078 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 MYH11P35749 1972 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 LRP3O75074 770 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 ATF2P15336 505 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 PSMC3P17980 439 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 CXCL12P48061 93 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 SATB1Q01826 763 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
IFT20-216ENST00000588477 DCAF4L1Q3SXM0 396 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 SLC8B1Q6J4K2 584 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 PRR23CQ6ZRP0 262 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 DEPTORQ8TB45 409 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 TNFRSF25Q93038 417 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 ZSWIM3Q96MP5 696 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
IFT20-216ENST00000588477 NUP210Q8TEM1 1887 aaPredicted RBP16.8■□□□□ 0.28
IFT20-216ENST00000588477 CHD8Q9HCK8 2581 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 WNT7AO00755 349 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 HRO43593 1189 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 GDF9O60383 454 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 NEMFO60524 1076 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 MICAL2O94851 1124 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 SEC24AO95486 1093 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 CHRNB1P11230 501 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 KCNA4P22459 653 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 CCNE1P24864 410 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 VIPR2P41587 438 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 NAMPTP43490 491 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
IFT20-216ENST00000588477 GAS6Q14393 721 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 CYP4A22Q5TCH4 519 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 CATSPER3Q86XQ3 398 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 TCEAL8Q8IYN2 117 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 HS6ST3Q8IZP7 471 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 MTMR9Q96QG7 549 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 BRMS1Q9HCU9 246 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 TRPV5Q9NQA5 729 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 ORC3Q9UBD5 711 aaPredicted RBP16.8■□□□□ 0.28
IFT20-216ENST00000588477 INSL5Q9Y5Q6 135 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 EML5Q05BV3 1969 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 ANK1P16157 1881 aa16.8■□□□□ 0.28
IFT20-216ENST00000588477 ZNF638Q14966 1978 aaKnown RBP16.79■□□□□ 0.28
IFT20-216ENST00000588477 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 CHURC1-FNTBB4DL54 471 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 ZNF263O14978 683 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 MED24O75448 989 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 CTDNEP1O95476 244 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 GJA1P17302 382 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 FNTBP49356 437 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 DMWDQ09019 674 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 SRSF5Q13243 272 aaKnown RBP16.79■□□□□ 0.28
IFT20-216ENST00000588477 CSRP2Q16527 193 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 NT5DC1Q5TFE4 455 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 PADI6Q6TGC4 694 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.79■□□□□ 0.28
IFT20-216ENST00000588477 ELMOD1Q8N336 334 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 SMARCD2Q92925 531 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 ZNF512Q96ME7 567 aaPredicted RBP16.79■□□□□ 0.28
IFT20-216ENST00000588477 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 KIFC3Q9BVG8 833 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
IFT20-216ENST00000588477 MYL4P12829 197 aa16.78■□□□□ 0.28
IFT20-216ENST00000588477 ATF7IP2Q5U623 682 aa16.78■□□□□ 0.28
IFT20-216ENST00000588477 IQCEQ6IPM2 695 aa16.78■□□□□ 0.28
IFT20-216ENST00000588477 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
IFT20-216ENST00000588477 CEP120Q8N960 986 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms