RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CHRNA1P02708 482 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 CCL5P13501 91 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 ATICP31939 592 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 TFAMQ00059 246 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 APBA1Q02410 837 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 MGAT3Q09327 533 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 NCOA4Q13772 614 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 MTF1Q14872 753 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 DNTTIP2Q5QJE6 756 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 GJB7Q6PEY0 223 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 ZNF662Q6ZS27 426 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 CEP120Q8N960 986 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 OR5B17Q8NGF7 314 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 ST3GAL5Q9UNP4 418 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 F8VZ95 297 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 FOXN3O00409 490 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 VNN1O95497 513 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 CXCL8P10145 99 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 SKIP12755 728 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 MAGEA1P43355 309 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 CDK7P50613 346 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 KIF11P52732 1056 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 YWHAEP62258 255 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 RBP5P82980 135 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 ARID5AQ03989 594 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 NFX1Q12986 1120 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 TMEM132DQ14C87 1099 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 ASTE1Q2TB18 679 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 LMBRD2Q68DH5 695 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 FAM228AQ86W67 206 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 C17orf53Q8N3J3 647 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 TATDN2Q93075 761 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 HAUS4Q9H6D7 363 aa11.3□□□□□ -0.6
CHMP1B-202ENST00000588284 RBAK-RBAKDNI3L0D1 243 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 KRT86O43790 486 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 EVI5O60447 810 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 P4HA1P13674 534 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TNNT1P13805 278 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TNFAIP3P21580 790 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 WNT7BP56706 349 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 BFSP2Q13515 415 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 BMS1Q14692 1282 aaKnown RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 FBXO47Q5MNV8 452 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 UBXN11Q5T124 520 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 SHC3Q92529 594 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 DESI2Q9BSY9 194 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 FAM124BQ9H5Z6 455 aaPredicted RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 PARP2Q9UGN5 583 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 PTPRJQ12913 1337 aa11.29□□□□□ -0.6
CHMP1B-202ENST00000588284 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 ZNF623O75123 536 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 SGPL1O95470 568 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 CD4P01730 458 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 TFRCP02786 760 aaKnown RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PLEKP08567 350 aaPredicted RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 CTSHP09668 335 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 KCNE1P15382 129 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 USP8P40818 1118 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 RAB27AP51159 221 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms