RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 C18orf25Q96B23 403 aaPredicted RBP20.54■□□□□ 0.88
TRIM47-205ENST00000587774 AK8Q96MA6 479 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 IRF2BPLQ9H1B7 796 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 POLIQ9UNA4 740 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
TRIM47-205ENST00000587774 BACE2Q9Y5Z0 518 aa20.54■□□□□ 0.88
TRIM47-205ENST00000587774 FAM186AA6NE01 2351 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 ANHXE9PGG2 379 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 SRFP11831 508 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 VARS2Q5ST30 1063 aaKnown RBP20.53■□□□□ 0.88
TRIM47-205ENST00000587774 ZPBP2Q6X784 338 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 REEP2Q9BRK0 252 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 HAPLN2Q9GZV7 340 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 NUMBLQ9Y6R0 609 aa20.53■□□□□ 0.88
TRIM47-205ENST00000587774 SPTBN4Q9H254 2564 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 RIF1Q5UIP0 2472 aaKnown RBP20.52■□□□□ 0.88
TRIM47-205ENST00000587774 KRBA1A5PL33 1030 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 PI15O43692 258 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 XYLBO75191 536 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 POU2F2P09086 479 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 NCKAP1LP55160 1127 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 ROR1Q01973 937 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 GRIN1Q05586 938 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 SLC10A6Q3KNW5 377 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 LARSQ9P2J5 1176 aaKnown RBP20.52■□□□□ 0.88
TRIM47-205ENST00000587774 WNT16Q9UBV4 365 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 TUBGCP4Q9UGJ1 667 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 KCNG1Q9UIX4 513 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 CA14Q9ULX7 337 aa20.52■□□□□ 0.88
TRIM47-205ENST00000587774 ZFP37Q9Y6Q3 630 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-205ENST00000587774 CXCL8P10145 99 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 UBA7P41226 1012 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 MCL1Q07820 350 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 UVSSAQ2YD98 709 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 SLC8B1Q6J4K2 584 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 BRAPQ7Z569 592 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 GPBP1Q86WP2 473 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 ITFG1Q8TB96 612 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 FGF13Q92913 245 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 FGF14Q92915 247 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 CALML4Q96GE6 196 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 BLOC1S4Q9NUP1 217 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 CDH7Q9ULB5 785 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 ODF2LQ9ULJ1 636 aa20.51■□□□□ 0.87
TRIM47-205ENST00000587774 WDR27A2RRH5 827 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 SYN3O14994 580 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 CLDN3O15551 220 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 SLC26A4O43511 780 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 RPL9P32969 192 aaKnown RBP20.5■□□□□ 0.87
TRIM47-205ENST00000587774 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM47-205ENST00000587774 DHX8Q14562 1220 aaKnown RBP20.5■□□□□ 0.87
TRIM47-205ENST00000587774 KARSQ15046 597 aaKnown RBP20.5■□□□□ 0.87
TRIM47-205ENST00000587774 PARM1Q6UWI2 310 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 HAUS6Q7Z4H7 955 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 TMEM130Q8N3G9 435 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 BICD1Q96G01 975 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 DNMT3BQ9UBC3 853 aaKnown RBP20.5■□□□□ 0.87
TRIM47-205ENST00000587774 NUB1Q9Y5A7 615 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 ZNF292O60281 2723 aa20.5■□□□□ 0.87
TRIM47-205ENST00000587774 H0YCG3 227 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 BMP15O95972 392 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 PLCG1P19174 1290 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 SPAG1Q07617 926 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
TRIM47-205ENST00000587774 PABPC1LQ4VXU2 614 aaKnown RBP20.49■□□□□ 0.87
TRIM47-205ENST00000587774 RTL10Q7L3V2 364 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 ZNF461Q8TAF7 563 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 KCNN1Q92952 543 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 SUSD3Q96L08 255 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
TRIM47-205ENST00000587774 RPP25Q9BUL9 199 aaKnown RBP20.49■□□□□ 0.87
TRIM47-205ENST00000587774 DMXL1Q9Y485 3027 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 VPS37CA5D8V6 355 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-205ENST00000587774 K7ENM7 598 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
TRIM47-205ENST00000587774 TBC1D4O60343 1298 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 GFRA3O60609 400 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 MCM4P33991 863 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 LONP1P36776 959 aaKnown RBP20.48■□□□□ 0.87
TRIM47-205ENST00000587774 TNFSF9P41273 254 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 ZNF131P52739 623 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 MCM6Q14566 821 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 NPAS3Q8IXF0 933 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 RASSF8Q8NHQ8 419 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 ING5Q8WYH8 240 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 TBC1D17Q9HA65 648 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 SLC2A4RGQ9NR83 387 aa20.48■□□□□ 0.87
TRIM47-205ENST00000587774 DCHS1Q96JQ0 3298 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 TTC26A0AVF1 554 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 FAM189A1O60320 539 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 ABLIM3O94929 683 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 FAM13AO94988 1023 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 RFX1P22670 979 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 LIG4P49917 911 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 ARPP19P56211 112 aa20.47■□□□□ 0.87
TRIM47-205ENST00000587774 CUL4AQ13619 759 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms