RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 SCARA3Q6AZY7 606 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 LRRC8DQ7L1W4 858 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 ENOSF1Q7L5Y1 443 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TATDN2Q93075 761 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 CXCL16Q9H2A7 254 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 NHEJ1Q9H9Q4 299 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 C1orf112Q9NSG2 853 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 FAM105AQ9NUU6 356 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PCDHB2Q9Y5E7 798 aa12.85□□□□□ -0.35
TNFRSF11A-203ENST00000587697 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 MGEA5O60502 916 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 NDUFA10O95299 355 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 LCA5LO95447 670 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 KCNE1P15382 129 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 CAPN2P17655 700 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 RAB27AP51159 221 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 MFAP3P55082 362 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 MYL6P60660 151 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 BFSP2Q13515 415 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 WDR44Q5JSH3 913 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PPM1KQ8N3J5 372 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 UBR7Q8N806 425 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TAF4BQ92750 862 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 JAKMIP2Q96AA8 810 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 ZMAT2Q96NC0 199 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PPP2R2CQ9Y2T4 447 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 ADGRG1Q9Y653 693 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 EPN1Q9Y6I3 576 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 PTPRSQ13332 1948 aa12.84□□□□□ -0.35
TNFRSF11A-203ENST00000587697 TTC3P53804 2025 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 KIAA0100Q14667 2235 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 EVI5O60447 810 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 PQBP1O60828 265 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ZNF623O75123 536 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 GFPT2O94808 682 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CCDC175P0C221 793 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 AKAP5P24588 427 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ANXA13P27216 316 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 KLHL30Q0D2K2 578 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 TRPC3Q13507 836 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CUL2Q13617 745 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 SGSM1Q2NKQ1 1148 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 FAM43BQ6ZT52 329 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 DPP3Q9NY33 737 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CENPFP49454 3210 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 MYH10P35580 1976 aa12.83□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ZNF263O14978 683 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 CCP110O43303 1012 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ITGB3P05106 788 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ITGA4P13612 1032 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ATF7P17544 494 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 ATICP31939 592 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
TNFRSF11A-203ENST00000587697 KIF11P52732 1056 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms