RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	ANKFY1	Q9P2R3	1169 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	CCDC39	Q9UFE4	941 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	FBXO2	Q9UK22	296 aa	Predicted RBP	27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	POLI	Q9UNA4	740 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	PODXL	O00592	558 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	MEFV	O15553	781 aa	Predicted RBP	27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	NPR3	P17342	541 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	PLCG1	P19174	1290 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	DDIT3	P35638	169 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	SLC39A14	Q15043	492 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	KARS	Q15046	597 aa	Known RBP	27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	SEZ6	Q53EL9	994 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	ZPBP2	Q6X784	338 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	SIX5	Q8N196	739 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	SLC7A14	Q8TBB6	771 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	RAD54L	Q92698	747 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	C18orf25	Q96B23	403 aa	Predicted RBP	27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	BLOC1S4	Q9NUP1	217 aa		27.61	■■■□□ 2.01
TCF3-210	ENST00000587235	XYLB	O75191	536 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	CFH	P08603	1231 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	MARCKS	P29966	332 aa	Predicted RBP	27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	RPL9	P32969	192 aa	Known RBP	27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	TXLNA	P40222	546 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	NOLC1	Q14978	699 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	SLC10A6	Q3KNW5	377 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	CWF19L1	Q69YN2	538 aa	Known RBP	27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	FAM173B	Q6P4H8	233 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	LRRC15	Q8TF66	581 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	WNT16	Q9UBV4	365 aa		27.6	■■■□□ 2.01
TCF3-210	ENST00000587235	CIT	O14578	2027 aa		27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	ANHX	E9PGG2	379 aa		27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	CLDN3	O15551	220 aa		27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	NASP	P49321	788 aa	Predicted RBP	27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	DHX8	Q14562	1220 aa	Known RBP	27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	GPBP1	Q86WP2	473 aa		27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	ST13P5	Q8NFI4	369 aa	Predicted RBP	27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	STK17A	Q9UEE5	414 aa		27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.59	■■■□□ 2.01
TCF3-210	ENST00000587235	PI15	O43692	258 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	SRF	P11831	508 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	ABCD1	P33897	745 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	MATR3	P43243	847 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	NCKAP1L	P55160	1127 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	MCL1	Q07820	350 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	HTR4	Q13639	388 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	VARS2	Q5ST30	1063 aa	Known RBP	27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	HAUS6	Q7Z4H7	955 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	KRI1	Q8N9T8	703 aa	Known RBP	27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	LARP4B	Q92615	738 aa	Known RBP	27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	EPSTI1	Q96J88	318 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	ZNF396	Q96N95	335 aa	Predicted RBP	27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	USP28	Q96RU2	1077 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	CDH7	Q9ULB5	785 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	NUB1	Q9Y5A7	615 aa		27.58	■■■□□ 2.01
TCF3-210	ENST00000587235	AOC1	P19801	751 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	ZNF131	P52739	623 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	CEBPZ	Q03701	1054 aa	Known RBP	27.57	■■■□□ 2
TCF3-210	ENST00000587235	RTL10	Q7L3V2	364 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	BICD1	Q96G01	975 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	REEP2	Q9BRK0	252 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	HAPLN2	Q9GZV7	340 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	PARVG	Q9HBI0	331 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	NUMBL	Q9Y6R0	609 aa		27.57	■■■□□ 2
TCF3-210	ENST00000587235	SYN3	O14994	580 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	POU2F2	P09086	479 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	MCM6	Q14566	821 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	SLC8B1	Q6J4K2	584 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	MYCT1	Q8N699	235 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	ZNF461	Q8TAF7	563 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	ITFG1	Q8TB96	612 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	HCFC1R1	Q9NWW0	138 aa		27.56	■■■□□ 2
TCF3-210	ENST00000587235	DNMT3B	Q9UBC3	853 aa	Known RBP	27.56	■■■□□ 2
TCF3-210	ENST00000587235	KRBA1	A5PL33	1030 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	STK25	O00506	426 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	KRT18	P05783	430 aa	Known RBP	27.55	■■■□□ 2
TCF3-210	ENST00000587235	CLTA	P09496	248 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	ROR1	Q01973	937 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	FGF13	Q92913	245 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	RTP3	Q9BQQ7	232 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	RPP25	Q9BUL9	199 aa	Known RBP	27.55	■■■□□ 2
TCF3-210	ENST00000587235	PLEKHA5	Q9HAU0	1116 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235	CA14	Q9ULX7	337 aa		27.55	■■■□□ 2
TCF3-210	ENST00000587235		H7C4K7	107 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	TBC1D4	O60343	1298 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	ABLIM3	O94929	683 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	FAM13A	O94988	1023 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	CXCL8	P10145	99 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	ARPP19	P56211	112 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	SPAG1	Q07617	926 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	MRPL58	Q14197	206 aa	Known RBP	27.54	■■■□□ 2
TCF3-210	ENST00000587235	STK38	Q15208	465 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	SPECC1	Q5M775	1068 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	RRAGB	Q5VZM2	374 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	PARM1	Q6UWI2	310 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	CCDC73	Q6ZRK6	1079 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	USP49	Q70CQ1	688 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	LINC00301	Q8NCQ3	95 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	GPR152	Q8TDT2	470 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	FGF14	Q92915	247 aa		27.54	■■■□□ 2
TCF3-210	ENST00000587235	SUSD3	Q96L08	255 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms