RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
TRIM47-203ENST00000586495 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 I3L4J1 428 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 CCL16O15467 120 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 TBCAO75347 108 aaKnown RBP18.51■□□□□ 0.55
TRIM47-203ENST00000586495 ELF1P32519 619 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 DDIT3P35638 169 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 MRE11P49959 708 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 CLCN5P51795 746 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 ZNF131P52739 623 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 GRIN1Q05586 938 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 SEZ6Q53EL9 994 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 VARS2Q5ST30 1063 aaKnown RBP18.51■□□□□ 0.55
TRIM47-203ENST00000586495 SLC44A3Q8N4M1 653 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 RSAD2Q8WXG1 361 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 C18orf25Q96B23 403 aaPredicted RBP18.51■□□□□ 0.55
TRIM47-203ENST00000586495 INTS4Q96HW7 963 aaKnown RBP18.51■□□□□ 0.55
TRIM47-203ENST00000586495 ZHX3Q9H4I2 956 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 WNT16Q9UBV4 365 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 CCDC39Q9UFE4 941 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 TBX20Q9UMR3 447 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 KMT2EQ8IZD2 1858 aa18.51■□□□□ 0.55
TRIM47-203ENST00000586495 HNRNPDLO14979 420 aaKnown RBP18.5■□□□□ 0.55
TRIM47-203ENST00000586495 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
TRIM47-203ENST00000586495 GALR2O43603 387 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-203ENST00000586495 PIGRP01833 764 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 CXCL8P10145 99 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 MCM4P33991 863 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 SLC8B1Q6J4K2 584 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 RSPO2Q6UXX9 243 aaPredicted RBP18.5■□□□□ 0.55
TRIM47-203ENST00000586495 APPL2Q8NEU8 664 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 FLCNQ8NFG4 579 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 ZNF461Q8TAF7 563 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 KIF12Q96FN5 646 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 SUSD3Q96L08 255 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 CDH7Q9ULB5 785 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 CLIC4Q9Y696 253 aa18.5■□□□□ 0.55
TRIM47-203ENST00000586495 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 MEFVO15553 781 aaPredicted RBP18.49■□□□□ 0.55
TRIM47-203ENST00000586495 NARSO43776 548 aaKnown RBP18.49■□□□□ 0.55
TRIM47-203ENST00000586495 SRFP11831 508 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 SYT1P21579 422 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 TXLNAP40222 546 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 NTHL1P78549 312 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 PPP2R3AQ06190 1150 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 PTPAQ15257 358 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 TMEM105Q8N8V8 129 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 KRI1Q8N9T8 703 aaKnown RBP18.49■□□□□ 0.55
TRIM47-203ENST00000586495 LRRC15Q8TF66 581 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 HAPLN2Q9GZV7 340 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
TRIM47-203ENST00000586495 STK17AQ9UEE5 414 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 UBQLN1Q9UMX0 589 aaKnown RBP18.49■□□□□ 0.55
TRIM47-203ENST00000586495 DOCK8Q8NF50 2099 aa18.49■□□□□ 0.55
TRIM47-203ENST00000586495 ANHXE9PGG2 379 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 OGTO15294 1046 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 CFHP08603 1231 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 CYP3A5P20815 502 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 MARCKSP29966 332 aaPredicted RBP18.48■□□□□ 0.55
TRIM47-203ENST00000586495 LRPAP1P30533 357 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 ROR1Q01973 937 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 RESTQ13127 1097 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 MRPL58Q14197 206 aaKnown RBP18.48■□□□□ 0.55
TRIM47-203ENST00000586495 CD302Q8IX05 232 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 SIX5Q8N196 739 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 EPSTI1Q96J88 318 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 RTP3Q9BQQ7 232 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 BACH2Q9BYV9 841 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 KCNH3Q9ULD8 1083 aa18.48■□□□□ 0.55
TRIM47-203ENST00000586495 SRPRBQ9Y5M8 271 aaKnown RBP18.48■□□□□ 0.55
TRIM47-203ENST00000586495 PRRG1O14668 218 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ABLIM3O94929 683 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 LRG1P02750 347 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ATF2P15336 505 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 AOC1P19801 751 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 RFX1P22670 979 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 TNFSF9P41273 254 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ARPP19P56211 112 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 GTF2BQ00403 316 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 HTR4Q13639 388 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 CTXN3Q4LDR2 81 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 PABPC1LQ4VXU2 614 aaKnown RBP18.47■□□□□ 0.55
TRIM47-203ENST00000586495 TPGS2Q68CL5 300 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ZNF280DQ6N043 979 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 MTSS1LQ765P7 747 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 DDX12PQ92771 950 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ATOH1Q92858 354 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-203ENST00000586495 FGF13Q92913 245 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 ZSCAN16Q9H4T2 348 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-203ENST00000586495 DNMT3BQ9UBC3 853 aaKnown RBP18.47■□□□□ 0.55
TRIM47-203ENST00000586495 TUBGCP4Q9UGJ1 667 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 FBXL5Q9UKA1 691 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 PCDHB8Q9UN66 801 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 NUMBLQ9Y6R0 609 aa18.47■□□□□ 0.55
TRIM47-203ENST00000586495 A0A0B4J269 797 aa18.46■□□□□ 0.55
TRIM47-203ENST00000586495 ARHGEF37A1IGU5 675 aa18.46■□□□□ 0.55
TRIM47-203ENST00000586495 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
TRIM47-203ENST00000586495 LACTBL1A8MY62 500 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms