RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 IGFLR1Q9H665 355 aa23.25■■□□□ 1.31
RETREG3-202ENST00000585726 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
RETREG3-202ENST00000585726 DERAQ9Y315 318 aa23.25■■□□□ 1.31
RETREG3-202ENST00000585726 C2CD2Q9Y426 696 aa23.25■■□□□ 1.31
RETREG3-202ENST00000585726 I3L4J1 428 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 SOD2P04179 222 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 CYP3A5P20815 502 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 BMP6P22004 513 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 MCM4P33991 863 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 SPATA1Q5VX52 437 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 LMBRD2Q68DH5 695 aaPredicted RBP23.24■■□□□ 1.31
RETREG3-202ENST00000585726 KLHL10Q6JEL2 608 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 ADSSL1Q8N142 457 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 HERC2P3Q9BVR0 1158 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 NGRNQ9NPE2 291 aaKnown RBP23.24■■□□□ 1.31
RETREG3-202ENST00000585726 DMAC2Q9NW81 257 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 NUB1Q9Y5A7 615 aa23.24■■□□□ 1.31
RETREG3-202ENST00000585726 SF3B1O75533 1304 aaKnown RBP eCLIP23.24■■□□□ 1.31
RETREG3-202ENST00000585726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.23■■□□□ 1.31
RETREG3-202ENST00000585726 HIDE1A8MVS5 230 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 PER2O15055 1255 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 DLATP10515 647 aaKnown RBP23.23■■□□□ 1.31
RETREG3-202ENST00000585726 CTSAP10619 480 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 CD44P16070 742 aaKnown RBP23.23■■□□□ 1.31
RETREG3-202ENST00000585726 NR2F2P24468 414 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 BRCC3P46736 316 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 CYP24A1Q07973 514 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 COBLL1Q53SF7 1204 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 FAM171A1Q5VUB5 890 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 PDE12Q6L8Q7 609 aaKnown RBP23.23■■□□□ 1.31
RETREG3-202ENST00000585726 KIAA1841Q6NSI8 718 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 CD300LGQ6UXG3 332 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 CEP57Q86XR8 500 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 FNBP1Q96RU3 617 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 TSG101Q99816 390 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 TLE6Q9H808 572 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 DPP3Q9NY33 737 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 STK39Q9UEW8 545 aa23.23■■□□□ 1.31
RETREG3-202ENST00000585726 URODP06132 367 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 RPL13P26373 211 aaKnown RBP23.22■■□□□ 1.31
RETREG3-202ENST00000585726 LRPAP1P30533 357 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 GTF2F1P35269 517 aaKnown RBP eCLIP23.22■■□□□ 1.31
RETREG3-202ENST00000585726 NRIP1P48552 1158 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 CASP4P49662 377 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 ADAM9Q13443 819 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 SURF1Q15526 300 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 EP400NLQ6ZTU2 488 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 SLC9A9Q8IVB4 645 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 MRPL43Q8N983 215 aaKnown RBP23.22■■□□□ 1.31
RETREG3-202ENST00000585726 CACTINQ8WUQ7 758 aaKnown RBP23.22■■□□□ 1.31
RETREG3-202ENST00000585726 PPP2R3CQ969Q6 453 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 EEF2KMTQ96G04 330 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 POP1Q99575 1024 aaKnown RBP23.22■■□□□ 1.31
RETREG3-202ENST00000585726 FRMD4BQ9Y2L6 1034 aa23.22■■□□□ 1.31
RETREG3-202ENST00000585726 TRIM49BA6NDI0 452 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 C2orf71A6NGG8 1288 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 TMEM189-UBE2V1I3L0A0 370 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 PSMA7O14818 248 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 PPEF2O14830 753 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 EFEMP2O95967 443 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 MBD3O95983 291 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 TMEM191BP0C7N4 346 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 TNNI1P19237 187 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 GLUD2P49448 558 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 PMS1P54277 932 aaKnown RBP23.21■■□□□ 1.31
RETREG3-202ENST00000585726 USP41Q3LFD5 358 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 ZCWPW2Q504Y3 356 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 C9orf57Q5W0N0 161 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 ANKRD40Q6AI12 368 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 CENPPQ6IPU0 288 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 NT5DC4Q86YG4 428 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 RNF168Q8IYW5 571 aaPredicted RBP23.21■■□□□ 1.31
RETREG3-202ENST00000585726 TRIML1Q8N9V2 468 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 MTMR12Q9C0I1 747 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 MRPL17Q9NRX2 175 aaKnown RBP23.21■■□□□ 1.31
RETREG3-202ENST00000585726 CTNND2Q9UQB3 1225 aa23.21■■□□□ 1.31
RETREG3-202ENST00000585726 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.21■■□□□ 1.31
RETREG3-202ENST00000585726 PDCD11Q14690 1871 aaKnown RBP23.2■■□□□ 1.3
RETREG3-202ENST00000585726 PTPRJQ12913 1337 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 TRAPPC3O43617 180 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 HYAL1Q12794 435 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 ELAVL2Q12926 359 aaKnown RBP23.2■■□□□ 1.3
RETREG3-202ENST00000585726 MYBPC2Q14324 1141 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 PSMD6Q15008 389 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 PTPN14Q15678 1187 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 OR5B17Q8NGF7 314 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 RIN2Q8WYP3 895 aaPredicted RBP23.2■■□□□ 1.3
RETREG3-202ENST00000585726 DHTKD1Q96HY7 919 aaPredicted RBP23.2■■□□□ 1.3
RETREG3-202ENST00000585726 ANKRD36BP1Q96IX9 119 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 MFSD14AQ96MC6 490 aa23.2■■□□□ 1.3
RETREG3-202ENST00000585726 ANK1P16157 1881 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 TRANK1O15050 2925 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 PRRC2BQ5JSZ5 2229 aaKnown RBP23.19■■□□□ 1.3
RETREG3-202ENST00000585726 ITGB3P05106 788 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 KRT19P08727 400 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 CCNE1P24864 410 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 PPP1R2P41236 205 aa23.19■■□□□ 1.3
RETREG3-202ENST00000585726 NFIL3Q16649 462 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms