RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 KCNG4Q8TDN1 519 aa14.34□□□□□ -0.11
ERBB2-220ENST00000584684 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-220ENST00000584684 ZNF707Q96C28 371 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-220ENST00000584684 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
ERBB2-220ENST00000584684 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
ERBB2-220ENST00000584684 ARIH1Q9Y4X5 557 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-220ENST00000584684 ZDBF2Q9HCK1 2354 aa14.34□□□□□ -0.11
ERBB2-220ENST00000584684 CUTAO60888 179 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 ZMYND10O75800 440 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 HNRNPA1P09651 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 IGFBP6P24592 240 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 TKTP29401 623 aaKnown RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 LRPAP1P30533 357 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 ZXDAP98168 799 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 RAB33AQ14088 237 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 SEZ6Q53EL9 994 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 SLFN12LQ6IEE8 588 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 SLC8B1Q6J4K2 584 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 OTOP3Q7RTS5 596 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 CD302Q8IX05 232 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 KREMEN2Q8NCW0 462 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 FEZF2Q8TBJ5 459 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 SUSD3Q96L08 255 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 WDR6Q9NNW5 1121 aaKnown RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 TUBGCP4Q9UGJ1 667 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 CPSF3Q9UKF6 684 aaKnown RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 UBQLN1Q9UMX0 589 aaKnown RBP14.33□□□□□ -0.12
ERBB2-220ENST00000584684 DOCK8Q8NF50 2099 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 CLUHO75153 1309 aa14.33□□□□□ -0.12
ERBB2-220ENST00000584684 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 XPOTO43592 962 aaKnown RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 RFPL2O75678 378 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 TNFSF9P41273 254 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 BRCC3P46736 316 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 CNNM4Q6P4Q7 775 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 SHC4Q6S5L8 630 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 TRIM67Q6ZTA4 783 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 BMP8AQ7Z5Y6 402 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 SMG7Q92540 1137 aaKnown RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 STAMQ92783 540 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 ACSF2Q96CM8 615 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 PRKD2Q9BZL6 878 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 MRPL44Q9H9J2 332 aaKnown RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 RPF1Q9H9Y2 349 aaKnown RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 TFIP11Q9UBB9 837 aaKnown RBP14.32□□□□□ -0.12
ERBB2-220ENST00000584684 SORCS3Q9UPU3 1222 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 DERAQ9Y315 318 aa14.32□□□□□ -0.12
ERBB2-220ENST00000584684 ANKRD63C9JTQ0 380 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 ADAM12O43184 909 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 TBC1D4O60343 1298 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 SPATA31D3P0C874 917 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 SP100P23497 879 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-220ENST00000584684 PAX3P23760 479 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 SIGLEC14Q08ET2 396 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 PKP1Q13835 747 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 MRPL58Q14197 206 aaKnown RBP14.31□□□□□ -0.12
ERBB2-220ENST00000584684 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
ERBB2-220ENST00000584684 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
ERBB2-220ENST00000584684 LIN9Q5TKA1 542 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 SPATA31D4Q6ZUB0 917 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 GLYCTKQ8IVS8 523 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 PDILTQ8N807 584 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 ASB7Q9H672 318 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 EXOC7Q9UPT5 735 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 HCN4Q9Y3Q4 1203 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 CDY1Q9Y6F8 540 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 TSC2P49815 1807 aa14.31□□□□□ -0.12
ERBB2-220ENST00000584684 LACTBL1A8MY62 500 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 TISP43B9A030 160 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 H7C4K7 107 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 I3L4J1 428 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 M0QZQ0 153 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 C8AP07357 584 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 OR1D2P34982 312 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 POSTNQ15063 836 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 UVSSAQ2YD98 709 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 SPATA1Q5VX52 437 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 ADALQ6DHV7 355 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 RSPO2Q6UXX9 243 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-220ENST00000584684 HFE2Q6ZVN8 426 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 IQUBQ8NA54 791 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 APPL2Q8NEU8 664 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 TRIM9Q9C026 710 aa14.3□□□□□ -0.12
ERBB2-220ENST00000584684 PANK4Q9NVE7 773 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms