RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ZAR1LA6NP61 321 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 KIAA0391O15091 583 aaKnown RBP5.47□□□□□ -1.53
COPS3-217ENST00000583160 NDUFS2O75306 463 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 MT-CO1P00395 513 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 ALAS1P13196 640 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 CXADRP78310 365 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 CREMQ03060 361 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 RNF187Q5TA31 235 aaPredicted RBP5.47□□□□□ -1.53
COPS3-217ENST00000583160 FOXR2Q6PJQ5 311 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 JADE3Q92613 823 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 FAXDC2Q96IV6 333 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 KRTAP17-1Q9BYP8 105 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 TMEM74BQ9NUR3 256 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 TESQ9UGI8 421 aaKnown RBP5.47□□□□□ -1.53
COPS3-217ENST00000583160 USP25Q9UHP3 1055 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 SAP30BPQ9UHR5 308 aaKnown RBP5.47□□□□□ -1.53
COPS3-217ENST00000583160 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
COPS3-217ENST00000583160 COL11A2P13942 1736 aaPredicted RBP5.46□□□□□ -1.54
COPS3-217ENST00000583160 NOMO3P69849 1222 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 ACAP2Q15057 778 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 NOMO2Q5JPE7 1267 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 STRIP1Q5VSL9 837 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 DPY19L2P1Q6NXN4 242 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 SLC44A3Q8N4M1 653 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 NUP133Q8WUM0 1156 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 NACC2Q96BF6 587 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 Q96MF0 132 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 GALNT9Q9HCQ5 603 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 KCNE5Q9UJ90 142 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 TRHDEQ9UKU6 1024 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 MTO1Q9Y2Z2 717 aaKnown RBP5.46□□□□□ -1.54
COPS3-217ENST00000583160 PCDHA13Q9Y5I0 950 aa5.46□□□□□ -1.54
COPS3-217ENST00000583160 CDHR4A6H8M9 788 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 KLHL33A6NCF5 533 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA12O60330 932 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 ESRRBO95718 433 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 MYBL2P10244 700 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 TYRP1P17643 537 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 C5AR1P21730 350 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 FDXRP22570 491 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PLA2G5P39877 138 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 MPLP40238 635 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 GUCY2FP51841 1108 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 CTXN1P60606 82 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 MPP3Q13368 585 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 CYP2A13Q16696 494 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 ATP2B3Q16720 1220 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 DACT2Q5SW24 774 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 SYDE2Q5VT97 1194 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 RSPH3Q86UC2 560 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 DCBLD1Q8N8Z6 715 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 FUBP1Q96AE4 644 aaKnown RBP5.45□□□□□ -1.54
COPS3-217ENST00000583160 TMX3Q96JJ7 454 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PNKPQ96T60 521 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
COPS3-217ENST00000583160 TDP1Q9NUW8 608 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 TBCCD1Q9NVR7 557 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA9Q9Y5G4 932 aaKnown RBP5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA8Q9Y5G5 932 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA7Q9Y5G6 932 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA6Q9Y5G7 932 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 PCDHGA3Q9Y5H0 932 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 MAST3O60307 1309 aa5.45□□□□□ -1.54
COPS3-217ENST00000583160 CADPSQ9ULU8 1353 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 ERN1O75460 977 aaKnown RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 CDK11BP21127 795 aaKnown RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 CXCR5P32302 372 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 CLK3P49761 638 aaKnown RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 CDKN1CP49918 316 aaPredicted RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 SLC16A1P53985 500 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 ITKQ08881 620 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 TARDBPQ13148 414 aaKnown RBP eCLIP5.44□□□□□ -1.54
COPS3-217ENST00000583160 MTMR1Q13613 665 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 ERCC6LQ2NKX8 1250 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 MIGA2Q7L4E1 593 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 NLGN4YQ8NFZ3 816 aaPredicted RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 HDAC10Q969S8 669 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 CCDC8Q9H0W5 538 aaPredicted RBP5.44□□□□□ -1.54
COPS3-217ENST00000583160 CASS4Q9NQ75 786 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 HSFX1Q9UBD0 423 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 SALL3Q9BXA9 1300 aa5.44□□□□□ -1.54
COPS3-217ENST00000583160 XPOTO43592 962 aaKnown RBP5.43□□□□□ -1.54
COPS3-217ENST00000583160 SBK3P0C264 359 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 CDC42EP1Q00587 391 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 SLFN5Q08AF3 891 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
COPS3-217ENST00000583160 ABCB5Q2M3G0 1257 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 PRR16Q569H4 304 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 SLC9A6Q92581 669 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 MED15Q96RN5 788 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 UNKLQ9H9P5 680 aaKnown RBP5.43□□□□□ -1.54
COPS3-217ENST00000583160 LIMCH1Q9UPQ0 1083 aa5.43□□□□□ -1.54
COPS3-217ENST00000583160 MYADML2A6NDP7 307 aa5.42□□□□□ -1.54
COPS3-217ENST00000583160 GRM6O15303 877 aa5.42□□□□□ -1.54
COPS3-217ENST00000583160 HTRA2O43464 458 aaPredicted RBP5.42□□□□□ -1.54
COPS3-217ENST00000583160 KATNA1O75449 491 aa5.42□□□□□ -1.54
COPS3-217ENST00000583160 HAUS5O94927 633 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms