RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DDHD2O94830 711 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 CST3P01034 146 aaPredicted RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 TNNC2P02585 160 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 TMEM191BP0C7N4 346 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 MXI1P50539 228 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 AP3M2P53677 418 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 PLCB2Q00722 1185 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 MYL7Q01449 175 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 GRIK3Q13003 919 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 KRT39Q6A163 491 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 ZNF280BQ86YH2 543 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 ABI1Q8IZP0 508 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 C1orf127Q8N9H9 656 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 BEST2Q8NFU1 509 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 CXorf38Q8TB03 319 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 CACTINQ8WUQ7 758 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 SEMA4DQ92854 862 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 ZNF689Q96CS4 500 aaPredicted RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 ANKRD36BP1Q96IX9 119 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 XPO4Q9C0E2 1151 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 GOLGA2P5Q9HBQ8 144 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 SLC38A7Q9NVC3 462 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 TBC1D13Q9NVG8 400 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 HCSTQ9UBK5 93 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 CACNG4Q9UBN1 327 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 SIX4Q9UIU6 781 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 UBQLN1Q9UMX0 589 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
RFFL-210ENST00000582308 RANBP2P49792 3224 aaKnown RBP10.3□□□□□ -0.76
RFFL-210ENST00000582308 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 GTPBP10A4D1E9 387 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 PPEF2O14830 753 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 P4HA2O15460 535 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 N4BP1O75113 896 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 GJB5O95377 273 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 HLA-DRAP01903 254 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 TPM2P07951 284 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 ATP2A2P16615 1042 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 CYP3A5P20815 502 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 IGFBP6P24592 240 aaPredicted RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 HTRA4P83105 476 aaPredicted RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 UBXN1Q04323 297 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 DSC1Q08554 894 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 KCNMA1Q12791 1236 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 BIRC3Q13489 604 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 NCOA4Q13772 614 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 PTPN21Q16825 1174 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 FILIP1LQ4L180 1135 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 PAN2Q504Q3 1202 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 EPC2Q52LR7 807 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 C9orf57Q5W0N0 161 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 HERC6Q8IVU3 1022 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 LMO3Q8TAP4 145 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 PHOSPHO2Q8TCD6 241 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 ELMO3Q96BJ8 720 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 SLC9A7Q96T83 725 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 PAAF1Q9BRP4 392 aa10.29□□□□□ -0.76
RFFL-210ENST00000582308 UBE2OQ9C0C9 1292 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 MTIF3Q9H2K0 278 aaKnown RBP10.29□□□□□ -0.76
RFFL-210ENST00000582308 CASTOR2A6NHX0 329 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 PIRO00625 290 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
RFFL-210ENST00000582308 PHACTR2O75167 634 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 ITGB3P05106 788 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 SLC9A1P19634 815 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 PON1P27169 355 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 LRPAP1P30533 357 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
RFFL-210ENST00000582308 PBX1P40424 430 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 ZNF75DP51815 510 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 MYL6P60660 151 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 RBP5P82980 135 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 RNASELQ05823 741 aaKnown RBP10.28□□□□□ -0.76
RFFL-210ENST00000582308 TUSC3Q13454 348 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 SYCP1Q15431 976 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 DPY19L2P1Q6NXN4 242 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 GBP6Q6ZN66 633 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 COLGALT2Q8IYK4 626 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
RFFL-210ENST00000582308 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 RSPH1Q8WYR4 309 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
RFFL-210ENST00000582308 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 PI4K2AQ9BTU6 479 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 TRIM5Q9C035 493 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 XYLT2Q9H1B5 865 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 CWH43Q9H720 699 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 NRDE2Q9H7Z3 1164 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
RFFL-210ENST00000582308 DNAJB4Q9UDY4 337 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms