RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 CEACAM1P13688 526 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 GSPT1P15170 499 aaKnown RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 FGFR3P22607 806 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 COPS2P61201 443 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 TFDP1Q14186 410 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 NECTIN1Q15223 517 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 SF3A2Q15428 464 aaKnown RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 SLC5A9Q2M3M2 681 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 FAM78AQ5JUQ0 283 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 SLC27A1Q6PCB7 646 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 OTUD6AQ7L8S5 288 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 MFSD6LQ8IWD5 586 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 RNF149Q8NC42 400 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 CCDC148Q8NFR7 591 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 ZNF461Q8TAF7 563 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 GATA6Q92908 595 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 CEP170P1Q96L14 293 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 MTRRQ9UBK8 725 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 MAFFQ9ULX9 164 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 HES2Q9Y543 173 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 ANKRD11Q6UB99 2663 aaPredicted RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 LOC400499M0QZD8 3231 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PKD1L2Q7Z442 2459 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 NOTCH4Q99466 2003 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 WDR27A2RRH5 827 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 TAF4O00268 1085 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 SLC27A2O14975 620 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ZNF263O14978 683 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 AXIN1O15169 862 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CHADO15335 359 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ADAM12O43184 909 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 TRAPPC3O43617 180 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RNF40O75150 1001 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RPP40O75818 363 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ABLIM3O94929 683 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 KIF4AO95239 1232 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 LRG1P02750 347 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 P4HBP07237 508 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CEBPBP17676 345 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ARF4P18085 180 aaPredicted RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CSRP1P21291 193 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CCNE1P24864 410 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 GDI1P31150 447 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 OR1D2P34982 312 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 NOVA1P51513 510 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 EPHA5P54756 1037 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 EXOSC10Q01780 885 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RING1Q06587 406 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 FCHO2Q0JRZ9 810 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 SRSF5Q13243 272 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PPP2R5CQ13362 524 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 GRM2Q14416 872 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 AMHR2Q16671 573 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 DAB2IPQ5VWQ8 1189 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PLA2G4FQ68DD2 849 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 SLC8B1Q6J4K2 584 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 VITQ6UXI7 678 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ANKS3Q6ZW76 656 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CEP57Q86XR8 500 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 RAB11FIP4Q86YS3 637 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 C4orf19Q8IY42 314 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 TCEAL8Q8IYN2 117 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 FAM177A1Q8N128 213 aaPredicted RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ING5Q8WYH8 240 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 TMEM143Q96AN5 459 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PRIMPOLQ96LW4 560 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 SH2D3AQ9BRG2 576 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 PAAF1Q9BRP4 392 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 NXF3Q9H4D5 531 aaKnown RBP6.91□□□□□ -1.3
TVP23B-210ENST00000582288 NEUROG3Q9Y4Z2 214 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 NID2Q14112 1375 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 CEP295Q9C0D2 2601 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 ITPR1Q14643 2758 aa6.91□□□□□ -1.3
TVP23B-210ENST00000582288 MYBPHLA2RUH7 354 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 GOLGA8BA8MQT2 603 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 INO80B-WBP1J3KQ70 363 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ADAMTS3O15072 1205 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ATG13O75143 517 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 IGHDP01880 384 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 THP07101 528 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ATF2P15336 505 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 AKAP5P24588 427 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CDC27P30260 824 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ELF1P32519 619 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 MPLP40238 635 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 NPEPPSP55786 919 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 MBTD1Q05BQ5 628 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CCINQ13939 588 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 EMC2Q15006 297 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 NAB2Q15742 525 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms