RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CDT1Q9H211 546 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 GOLGA2P5Q9HBQ8 144 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 AVENQ9NQS1 362 aaPredicted RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 SH2B1Q9NRF2 756 aaPredicted RBP11.63□□□□□ -0.55
RFFL-209ENST00000581265 SLC38A7Q9NVC3 462 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 HCFC1R1Q9NWW0 138 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 GDE1Q9NZC3 331 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 ARHGAP28Q9P2N2 729 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 USP18Q9UMW8 372 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 VPS13AQ96RL7 3174 aa11.63□□□□□ -0.55
RFFL-209ENST00000581265 OTOGLQ3ZCN5 2332 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 ARHGEF37A1IGU5 675 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 E9PMD0 336 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 I3L4J1 428 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 ABLIM1O14639 778 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 SYN3O14994 580 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 TBC1D4O60343 1298 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 MCF2P10911 925 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 KCNE1P15382 129 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 RPL9P32969 192 aaKnown RBP11.62□□□□□ -0.55
RFFL-209ENST00000581265 PRPHP41219 470 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 BRCC3P46736 316 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 PFKPQ01813 784 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 PRKCQQ04759 706 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 DMP1Q13316 513 aaPredicted RBP11.62□□□□□ -0.55
RFFL-209ENST00000581265 MRPL58Q14197 206 aaKnown RBP11.62□□□□□ -0.55
RFFL-209ENST00000581265 IL17AQ16552 155 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 ZNF568Q3ZCX4 644 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 KRT79Q5XKE5 535 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 RINT1Q6NUQ1 792 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 C1orf186Q6ZWK4 172 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 TAS1R3Q7RTX0 852 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 ACAP3Q96P50 834 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
RFFL-209ENST00000581265 FOXQ1Q9C009 403 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 KMT5AQ9NQR1 393 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 MRPS23Q9Y3D9 190 aaKnown RBP11.62□□□□□ -0.55
RFFL-209ENST00000581265 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 WDR87Q6ZQQ6 2873 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 NOTCH4Q99466 2003 aa11.62□□□□□ -0.55
RFFL-209ENST00000581265 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 HIP1RO75146 1068 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 ECI2O75521 394 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 RHOP08100 348 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 ADRB1P08588 477 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 ATF2P15336 505 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 PTPN2P17706 415 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 KCNA4P22459 653 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 CDC25AP30304 524 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 OSTNP61366 133 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 ROR1Q01973 937 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 MAPK7Q13164 816 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 MLF2Q15773 248 aaPredicted RBP11.61□□□□□ -0.55
RFFL-209ENST00000581265 TCEAL8Q8IYN2 117 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 MAML2Q8IZL2 1156 aaPredicted RBP11.61□□□□□ -0.55
RFFL-209ENST00000581265 KCTD17Q8N5Z5 321 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 SUMF1Q8NBK3 374 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 SPIRE2Q8WWL2 714 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 BORCS6Q96GS4 357 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 NELL2Q99435 816 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 KIF2CQ99661 725 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 TCHPQ9BT92 498 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 MMTAG2Q9BU76 263 aaKnown RBP11.61□□□□□ -0.55
RFFL-209ENST00000581265 RUSC1Q9BVN2 902 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 CNTN3Q9P232 1028 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 RALYQ9UKM9 306 aaKnown RBP11.61□□□□□ -0.55
RFFL-209ENST00000581265 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
RFFL-209ENST00000581265 F5P12259 2224 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 WDR27A2RRH5 827 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 SFI1A8K8P3 1242 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 PP2D1A8MPX8 630 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 H7C4K7 107 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 PODXLO00592 558 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 MEFVO15553 781 aaPredicted RBP11.6□□□□□ -0.55
RFFL-209ENST00000581265 LRRN2O75325 713 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 MICAL2O94851 1124 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 GUCY2CP25092 1073 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 ELF1P32519 619 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 SLC5A9Q2M3M2 681 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 ZNF528Q3MIS6 628 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 TPGS2Q68CL5 300 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 POTEHQ6S545 545 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 MPZL3Q6UWV2 235 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 DTHD1Q6ZMT9 781 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 KCNK18Q7Z418 384 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 MCRS1Q96EZ8 462 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 SUSD3Q96L08 255 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
RFFL-209ENST00000581265 MAFFQ9ULX9 164 aa11.6□□□□□ -0.55
RFFL-209ENST00000581265 MTF2Q9Y483 593 aaPredicted RBP11.6□□□□□ -0.55
RFFL-209ENST00000581265 PRRG1O14668 218 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms