RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PRKCBP05771 671 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 SPATA31C1P0DKV0 1188 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 XRCC6P12956 609 aaKnown RBP eCLIP21.07■□□□□ 0.96
NDEL1-209ENST00000580738 ATP2B1P20020 1258 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 SATB1Q01826 763 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 DMWDQ09019 674 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 PPP2R5DQ14738 602 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 MAPK6Q16659 721 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 SLC8B1Q6J4K2 584 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 VITQ6UXI7 678 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 TNFRSF25Q93038 417 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 CHAMP1Q96JM3 812 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 SEMA4GQ9NTN9 838 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 PIAS3Q9Y6X2 628 aa21.07■□□□□ 0.96
NDEL1-209ENST00000580738 ACKR2O00590 384 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 HRO43593 1189 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 TRAPPC3O43617 180 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 CDKL5O76039 1030 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 SEC24AO95486 1093 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 GDI1P31150 447 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 ELF1P32519 619 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 CCR3P51677 355 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 ARPP19P56211 112 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 SRSF5Q13243 272 aaKnown RBP21.06■□□□□ 0.96
NDEL1-209ENST00000580738 SIM2Q14190 667 aaPredicted RBP21.06■□□□□ 0.96
NDEL1-209ENST00000580738 GAS6Q14393 721 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 CENPQQ7L2Z9 268 aaPredicted RBP21.06■□□□□ 0.96
NDEL1-209ENST00000580738 MCPH1Q8NEM0 835 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 IRF7Q92985 503 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 C2orf40Q9H1Z8 148 aa21.06■□□□□ 0.96
NDEL1-209ENST00000580738 STK36Q9NRP7 1315 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 LRP3O75074 770 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 REC8O95072 547 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 PSMC3P17980 439 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 VIPR2P41587 438 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 CXCL12P48061 93 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 SOX4Q06945 474 aaPredicted RBP21.05■□□□□ 0.96
NDEL1-209ENST00000580738 PRR23CQ6ZRP0 262 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 TCEAL8Q8IYN2 117 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 IER2Q9BTL4 223 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 CYP4F11Q9HBI6 524 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 TRPV5Q9NQA5 729 aa21.05■□□□□ 0.96
NDEL1-209ENST00000580738 NCANO14594 1321 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CHURC1-FNTBB4DL54 471 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 ZNF197O14709 1029 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 MICAL2O94851 1124 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CTDNEP1O95476 244 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CHRNB1P11230 501 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 ATF2P15336 505 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CCNE1P24864 410 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 FNTBP49356 437 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CSRP2Q16527 193 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 PDZD4Q76G19 769 aaPredicted RBP21.04■□□□□ 0.96
NDEL1-209ENST00000580738 CATSPER3Q86XQ3 398 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 HS6ST3Q8IZP7 471 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 SMARCD2Q92925 531 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 UROC1Q96N76 676 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 MTMR9Q96QG7 549 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 KIFC3Q9BVG8 833 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 POLD4Q9HCU8 107 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 PDRG1Q9NUG6 133 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 INSL5Q9Y5Q6 135 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 COL4A2P08572 1712 aa21.04■□□□□ 0.96
NDEL1-209ENST00000580738 SMIM28A0A1B0GU29 152 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 NEMFO60524 1076 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 MOSPD3O75425 235 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 MED24O75448 989 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 GJA1P17302 382 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 KRT2P35908 639 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 DCAF4L1Q3SXM0 396 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 NT5DC1Q5TFE4 455 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 DEPTORQ8TB45 409 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
NDEL1-209ENST00000580738 KCNA4P22459 653 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 NAMPTP43490 491 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 CYP4A22Q5TCH4 519 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 ATF7IP2Q5U623 682 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 PADI6Q6TGC4 694 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 RBM12Q9NTZ6 932 aaKnown RBP21.02■□□□□ 0.96
NDEL1-209ENST00000580738 CEP72Q9P209 647 aa21.02■□□□□ 0.96
NDEL1-209ENST00000580738 ORC3Q9UBD5 711 aaPredicted RBP21.02■□□□□ 0.96
NDEL1-209ENST00000580738 ARNTLO00327 626 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 ZNF263O14978 683 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 FDPSP14324 419 aaKnown RBP21.01■□□□□ 0.95
NDEL1-209ENST00000580738 HOXC13P31276 330 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 WDR44Q5JSH3 913 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 HEATR6Q6AI08 1181 aaKnown RBP21.01■□□□□ 0.95
NDEL1-209ENST00000580738 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.01■□□□□ 0.95
NDEL1-209ENST00000580738 SPEM1Q8N4L4 309 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 CEP120Q8N960 986 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 ZSCAN18Q8TBC5 510 aaPredicted RBP21.01■□□□□ 0.95
NDEL1-209ENST00000580738 NACC1Q96RE7 527 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 TMEM60Q9H2L4 133 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 C2orf42Q9NWW7 574 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 FBXL5Q9UKA1 691 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 TPCN1Q9ULQ1 816 aa21.01■□□□□ 0.95
NDEL1-209ENST00000580738 TICRRQ7Z2Z1 1910 aa21■□□□□ 0.95
NDEL1-209ENST00000580738 K7ESF4 209 aa21■□□□□ 0.95
NDEL1-209ENST00000580738 PFKFB2O60825 505 aa21■□□□□ 0.95
NDEL1-209ENST00000580738 MYL4P12829 197 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms