RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 CPB2Q96IY4 423 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 ZNF333Q96JL9 665 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 FAM81BQ96LP2 452 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 FNBP1Q96RU3 617 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 TSPAN18Q96SJ8 248 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 PPP1R16BQ96T49 567 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 CHP1Q99653 195 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 ADPGKQ9BRR6 497 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 TCHPQ9BT92 498 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 VRTNQ9H8Y1 702 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 PLEKHA5Q9HAU0 1116 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 RAB20Q9NX57 234 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 DERAQ9Y315 318 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 NOC2LQ9Y3T9 749 aaKnown RBP8.61□□□□□ -1.03
KPNB1-210ENST00000580573 C2CD2Q9Y426 696 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 CDY2AQ9Y6F7 541 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 TSC2P49815 1807 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 SCN5AQ14524 2016 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 MICAL3Q7RTP6 2002 aa8.61□□□□□ -1.03
KPNB1-210ENST00000580573 KIAA0100Q14667 2235 aaKnown RBP8.61□□□□□ -1.03
KPNB1-210ENST00000580573 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 EIF3CLB5ME19 914 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ARVCFO00192 962 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SMAPO00193 183 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 STAU1O95793 577 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ASS1P00966 412 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CD4P01730 458 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CXCL8P10145 99 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 DLATP10515 647 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 COL6A1P12109 1028 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CCL5P13501 91 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CAPN2P17655 700 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 DSC3Q14574 896 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 MTF1Q14872 753 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 MTFR1Q15390 333 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ZBTB6Q15916 424 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SLC9C1Q4G0N8 1177 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SEZ6Q53EL9 994 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 FBXO47Q5MNV8 452 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 FBXO46Q6PJ61 603 aaPredicted RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 RRAGAQ7L523 313 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CACNA2D4Q7Z3S7 1137 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CDR2LQ86X02 465 aaPredicted RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ARHGEF19Q8IW93 802 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 REXO1L1PQ8IX06 675 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 FAM126BQ8IXS8 530 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 THNSL1Q8IYQ7 743 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 UBR7Q8N806 425 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 USP38Q8NB14 1042 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SNX27Q96L92 541 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 KREMEN1Q96MU8 473 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 EIF3CQ99613 913 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 XYLT2Q9H1B5 865 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ERVK-5Q9HDB9 667 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 NLRC4Q9NPP4 1024 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 STARD7Q9NQZ5 370 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 DNAJC12Q9UKB3 198 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 REXO2Q9Y3B8 237 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
KPNB1-210ENST00000580573 MYH10P35580 1976 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 ALPK3Q96L96 1907 aa8.6□□□□□ -1.03
KPNB1-210ENST00000580573 USP27XA6NNY8 438 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 LACTBL1A8MY62 500 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 KBTBD13C9JR72 458 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 M0QZ92 97 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 ZNF263O14978 683 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 ZNF623O75123 536 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 GFPT2O94808 682 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 NDUFA10O95299 355 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 HLA-DRAP01903 254 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 SERPING1P05155 500 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 KCNE1P15382 129 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 CD46P15529 392 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 FERP16591 822 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 TNNI1P19237 187 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 FGFR4P22455 802 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 SOX5P35711 763 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 MATR3P43243 847 aaKnown RBP eCLIP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 CHMP4BP1P59074 171 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 NCBP1Q09161 790 aaKnown RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 LPIN1Q14693 890 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 DRAP1Q14919 205 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-210ENST00000580573 DUOXA2Q1HG44 320 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 SFMBT2Q5VUG0 894 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 GJB7Q6PEY0 223 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 TOGARAM2Q6ZUX3 1019 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 ENOSF1Q7L5Y1 443 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 TRAPPC11Q7Z392 1133 aa8.59□□□□□ -1.03
KPNB1-210ENST00000580573 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms