RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 FOXD4L5Q5VV16 416 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-214ENST00000580073 KRT79Q5XKE5 535 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 EEF1DP3Q658K8 133 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 NPAS3Q8IXF0 933 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 LEMD2Q8NC56 503 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 SNX29Q8TEQ0 813 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 FOXD4L4Q8WXT5 416 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-214ENST00000580073 DNASE1L2Q92874 299 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 IER2Q9BTL4 223 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 FOXQ1Q9C009 403 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.64□□□□□ -0.07
TRAF4-214ENST00000580073 SPATA6Q9NWH7 488 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-214ENST00000580073 MAFFQ9ULX9 164 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 RBM19Q9Y4C8 960 aaKnown RBP14.64□□□□□ -0.07
TRAF4-214ENST00000580073 NUB1Q9Y5A7 615 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 RHOP08100 348 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 MCF2P10911 925 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 PTPN2P17706 415 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 TKTP29401 623 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 RPL9P32969 192 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 DDIT3P35638 169 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 NTHL1P78549 312 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 STRN3Q13033 797 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 SNW1Q13573 536 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 PPP2R5DQ14738 602 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 IL17AQ16552 155 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 SLC8B1Q6J4K2 584 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 ZNF280DQ6N043 979 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 GPR161Q8N6U8 529 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 KXD1Q9BQD3 176 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 DDX23Q9BUQ8 820 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 KIFC3Q9BVG8 833 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 KMT5AQ9NQR1 393 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 DDX19AQ9NUU7 478 aaKnown RBP14.63□□□□□ -0.07
TRAF4-214ENST00000580073 KIAA1024Q9UPX6 916 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 PCDHGA2Q9Y5H1 932 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 R4GN57 208 aa14.63□□□□□ -0.07
TRAF4-214ENST00000580073 SMIM28A0A1B0GU29 152 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ARHGEF37A1IGU5 675 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 PODXLO00592 558 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 MICAL2O94851 1124 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ANK1P16157 1881 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 SDHBP21912 280 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 RPS9P46781 194 aaKnown RBP14.62□□□□□ -0.07
TRAF4-214ENST00000580073 PEX3P56589 373 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ROR1Q01973 937 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 SLC44A4Q53GD3 710 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 TPGS2Q68CL5 300 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 MPZL3Q6UWV2 235 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ZNF852Q6ZMS4 543 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 PDZD4Q76G19 769 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-214ENST00000580073 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ITFG1Q8TB96 612 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ELSPBP1Q96BH3 223 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 CHAMP1Q96JM3 812 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 OXCT2Q9BYC2 517 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-214ENST00000580073 CDT1Q9H211 546 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 LTB4R2Q9NPC1 389 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 ARHGAP28Q9P2N2 729 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 DNMT3BQ9UBC3 853 aaKnown RBP14.62□□□□□ -0.07
TRAF4-214ENST00000580073 TSC2P49815 1807 aa14.62□□□□□ -0.07
TRAF4-214ENST00000580073 RALGAPA1Q6GYQ0 2036 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 H0YCG3 227 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ADAM12O43184 909 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ATF2P15336 505 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 KCNE1P15382 129 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 MCM4P33991 863 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 PRPHP41219 470 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 NPTX2P47972 431 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 SMTNP53814 917 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 BECN1Q14457 450 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 PUM1Q14671 1186 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 NOLC1Q14978 699 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 XKR4Q5GH76 650 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 NT5DC1Q5TFE4 455 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 IQCEQ6IPM2 695 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 TPRG1Q6ZUI0 275 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 TCEAL8Q8IYN2 117 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 IGSF22Q8N9C0 903 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 APPL2Q8NEU8 664 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ATRIPQ8WXE1 791 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ING5Q8WYH8 240 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ACO2Q99798 780 aaKnown RBP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 FAM126AQ9BYI3 521 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 GOLGA2P5Q9HBQ8 144 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 HCFC1R1Q9NWW0 138 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 CNTN3Q9P232 1028 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 NCDNQ9UBB6 729 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 DMDP11532 3685 aa14.61□□□□□ -0.07
TRAF4-214ENST00000580073 ZNF638Q14966 1978 aaKnown RBP14.61□□□□□ -0.07
TRAF4-214ENST00000580073 FAM170BA6NMN3 283 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 MAN2B1O00754 1011 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms