RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 KCNB1Q14721 858 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 ODF1Q14990 250 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SLC5A9Q2M3M2 681 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SLC10A6Q3KNW5 377 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TMEM240Q5SV17 173 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 AKNAD1Q5T1N1 836 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 CAPRIN2Q6IMN6 1127 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 NOSTRINQ8IVI9 506 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 OR8H3Q8N146 312 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TMCO5AQ8N6Q1 288 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 MFSD2AQ8NA29 543 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SUPT20HQ8NEM7 779 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 ZMIZ2Q8NF64 920 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 OR52K1Q8NGK4 314 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 OR6P1Q8NGX9 317 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 PLBD2Q8NHP8 589 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 RUBCNQ92622 972 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 ELMO3Q96BJ8 720 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 Q96M66 194 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 TTC1Q99614 292 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 MENTQ9BUN1 341 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 SIL1Q9H173 461 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 DUSP15Q9H1R2 295 aaPredicted RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 LIN28AQ9H9Z2 209 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 AASSQ9UDR5 926 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 PTBP2Q9UKA9 531 aaKnown RBP7.08□□□□□ -1.28
COPS3-216ENST00000579716 ITGB1BP2Q9UKP3 347 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 DENND2AQ9ULE3 1009 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 ZNF711Q9Y462 761 aa7.08□□□□□ -1.28
COPS3-216ENST00000579716 CLRN2A0PK11 232 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 A6NLC8 198 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 PQBP1O60828 265 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 SRGAP2O75044 1071 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SLC22A3O75751 556 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 ENDOD1O94919 500 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SERPINC1P01008 464 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 C6orf222P0C671 652 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 DHRS4L1P0CG22 281 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 DLATP10515 647 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 HOXA5P20719 270 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 GIPRP48546 466 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CDR1P51861 262 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 GSCP56915 257 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 BNIP1Q12981 228 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SMAD4Q13485 552 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 LRRC14Q15048 493 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 ABCB5Q2M3G0 1257 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 ZNF362Q5T0B9 420 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 OLFM4Q6UX06 510 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CENPQQ7L2Z9 268 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 GPR155Q7Z3F1 870 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CDH24Q86UP0 819 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 FAM114A1Q8IWE2 563 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CCDC83Q8IWF9 413 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 LRRC47Q8N1G4 583 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 COG1Q8WTW3 980 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 ZFAND2BQ8WV99 257 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 CASP10Q92851 521 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 DHX58Q96C10 678 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 FUBP3Q96I24 572 aaKnown RBP eCLIP7.07□□□□□ -1.28
COPS3-216ENST00000579716 SAMD11Q96NU1 681 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 DDX23Q9BUQ8 820 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 OSBPL10Q9BXB5 764 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 VPS11Q9H270 941 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 PARVGQ9HBI0 331 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 AGO2Q9UKV8 859 aaKnown RBP7.07□□□□□ -1.28
COPS3-216ENST00000579716 CCPG1Q9ULG6 757 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 PRELID1Q9Y255 219 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SCRIBQ14160 1630 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 SMARCA2P51531 1590 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 ADAMTS20P59510 1910 aa7.07□□□□□ -1.28
COPS3-216ENST00000579716 FLT1P17948 1338 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 PLSCR1O15162 318 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 ZSCAN9O15535 394 aaPredicted RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 RNF113AO15541 343 aaKnown RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 THAP12O43422 761 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 RPSAP08865 295 aaKnown RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 ALAS1P13196 640 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 PDGFRAP16234 1089 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 SLC26A5P58743 744 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 COG7P83436 770 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 CD83Q01151 205 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 TFCP2Q12800 502 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 SGCGQ13326 291 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 LAMB3Q13751 1172 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 BLMHQ13867 455 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 MLECQ14165 292 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 NAA25Q14CX7 972 aa7.06□□□□□ -1.28
COPS3-216ENST00000579716 RBBP5Q15291 538 aaKnown RBP7.06□□□□□ -1.28
COPS3-216ENST00000579716 GAB4Q2WGN9 574 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms