RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 CUL4BQ13620 913 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 KCNC3Q14003 757 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 SMAD2Q15796 467 aaKnown RBP19.01■□□□□ 0.63
ITGB4-205ENST00000579211 ENOX2Q16206 610 aaKnown RBP19.01■□□□□ 0.63
ITGB4-205ENST00000579211 PSMD5Q16401 504 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 CNNM4Q6P4Q7 775 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 PRSS55Q6UWB4 352 aaPredicted RBP19.01■□□□□ 0.63
ITGB4-205ENST00000579211 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
ITGB4-205ENST00000579211 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 SMRP1Q8NCR6 262 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 CCDC47Q96A33 483 aaKnown RBP19.01■□□□□ 0.63
ITGB4-205ENST00000579211 PAGE5Q96GU1 130 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 TSPAN18Q96SJ8 248 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 IKZF4Q9H2S9 585 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 STYXL1Q9Y6J8 313 aa19.01■□□□□ 0.63
ITGB4-205ENST00000579211 TTC28Q96AY4 2481 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 A0A1W2PQ27 194 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 A0A1W2PQ64 194 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 A0A1W2PQD8 194 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 EFEMP2O95967 443 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 GLUD1P00367 558 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 GARTP22102 1010 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 MCM4P33991 863 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 BRCC3P46736 316 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 CLCN4P51793 760 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 NDUFA8P51970 172 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 TMEM132DQ14C87 1099 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 RTP2Q5QGT7 225 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
ITGB4-205ENST00000579211 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 BEST2Q8NFU1 509 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 SLC22A17Q8WUG5 538 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 FBXL18Q96ME1 805 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 POP1Q99575 1024 aaKnown RBP19■□□□□ 0.63
ITGB4-205ENST00000579211 FAM213AQ9BRX8 229 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 FGFBP2Q9BYJ0 223 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 PCIF1Q9H4Z3 704 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 RXFP1Q9HBX9 757 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 EXOC1Q9NV70 894 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 FNIP2Q9P278 1114 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 PRKAG3Q9UGI9 489 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 TUBGCP4Q9UGJ1 667 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 USP15Q9Y4E8 981 aaPredicted RBP19■□□□□ 0.63
ITGB4-205ENST00000579211 SCN1AP35498 2009 aa19■□□□□ 0.63
ITGB4-205ENST00000579211 I3L4J1 428 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 EIF3DO15371 548 aaKnown RBP eCLIP18.99■□□□□ 0.63
ITGB4-205ENST00000579211 ACTN4O43707 911 aaKnown RBP18.99■□□□□ 0.63
ITGB4-205ENST00000579211 RPL17P18621 184 aaKnown RBP18.99■□□□□ 0.63
ITGB4-205ENST00000579211 CYP3A5P20815 502 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 ITIH3Q06033 890 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 JADE1Q6IE81 842 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 SYCE2Q6PIF2 218 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 GPR65Q8IYL9 337 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 SAAL1Q96ER3 474 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 ASB7Q9H672 318 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 SLC39A2Q9NP94 309 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 HPSEQ9Y251 543 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 VCANP13611 3396 aa18.99■□□□□ 0.63
ITGB4-205ENST00000579211 MEFVO15553 781 aaPredicted RBP18.98■□□□□ 0.63
ITGB4-205ENST00000579211 FAM189A1O60320 539 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 IL18RAPO95256 599 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 MYL1P05976 194 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 SPATA31D3P0C874 917 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 ADSSP30520 456 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 SPATA31D4Q6ZUB0 917 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 GJD3Q8N144 294 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 C12orf76Q8N812 135 aaPredicted RBP18.98■□□□□ 0.63
ITGB4-205ENST00000579211 C3orf58Q8NDZ4 430 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 LNX1Q8TBB1 728 aaPredicted RBP18.98■□□□□ 0.63
ITGB4-205ENST00000579211 ZNF507Q8TCN5 953 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 PIK3R5Q8WYR1 880 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 RIPOR3Q96MK2 946 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 SFXN1Q9H9B4 322 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 MAN1C1Q9NR34 630 aa18.98■□□□□ 0.63
ITGB4-205ENST00000579211 GOLGA8IPA6NC78 632 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 GOLGA8JA6NMD2 632 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 KIAA0391O15091 583 aaKnown RBP18.97■□□□□ 0.63
ITGB4-205ENST00000579211 FGFR3P22607 806 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 TKTP29401 623 aaKnown RBP18.97■□□□□ 0.63
ITGB4-205ENST00000579211 POU5F1Q01860 360 aaKnown RBP18.97■□□□□ 0.63
ITGB4-205ENST00000579211 PSMD2Q13200 908 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 CBX2Q14781 532 aaPredicted RBP18.97■□□□□ 0.63
ITGB4-205ENST00000579211 ATAT1Q5SQI0 421 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 DSTYKQ6XUX3 929 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 ANKS3Q6ZW76 656 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 ADHFE1Q8IWW8 467 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 NELFCDQ8IXH7 590 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 GPD1LQ8N335 351 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 GLIS3Q8NEA6 775 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 S1PR5Q9H228 398 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 ADAM7Q9H2U9 754 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 RBAKQ9NYW8 714 aaPredicted RBP18.97■□□□□ 0.63
ITGB4-205ENST00000579211 DERAQ9Y315 318 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 UBE4BO95155 1302 aa18.97■□□□□ 0.63
ITGB4-205ENST00000579211 MYO10Q9HD67 2058 aa18.96■□□□□ 0.63
ITGB4-205ENST00000579211 H7C4K7 107 aa18.96■□□□□ 0.63
ITGB4-205ENST00000579211 EXTL3O43909 919 aa18.96■□□□□ 0.63
ITGB4-205ENST00000579211 ZNF202O95125 648 aa18.96■□□□□ 0.63
ITGB4-205ENST00000579211 IGFBP6P24592 240 aaPredicted RBP18.96■□□□□ 0.63
ITGB4-205ENST00000579211 MTHFRP42898 656 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms