RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RTP3Q9BQQ7 232 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 REEP2Q9BRK0 252 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KCND2Q9NZV8 630 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 WNT16Q9UBV4 365 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TUBGCP4Q9UGJ1 667 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CDH7Q9ULB5 785 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 BACE2Q9Y5Z0 518 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 WDR27A2RRH5 827 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 H0YCG3 227 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 H7C4K7 107 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ABLIM1O14639 778 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PRRG1O14668 218 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PAPLNO95428 1278 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KCNE1P15382 129 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RPL9P32969 192 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KARSQ15046 597 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 UVSSAQ2YD98 709 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CTXN3Q4LDR2 81 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 XKR4Q5GH76 650 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MTSS1LQ765P7 747 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FAM212AQ96EL1 285 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KXD1Q9BQD3 176 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NTPCRQ9BSD7 190 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RPP25Q9BUL9 199 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TBC1D17Q9HA65 648 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CYP4F11Q9HBI6 524 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ARHGEF3Q9NR81 526 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DNMT3BQ9UBC3 853 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ODF2LQ9ULJ1 636 aa10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MRPS23Q9Y3D9 190 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-211ENST00000578996 USP34Q70CQ2 3546 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 VWA8A3KMH1 1905 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MYO10Q9HD67 2058 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ANHXE9PGG2 379 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SYN3O14994 580 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MEFVO15553 781 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TBCAO75347 108 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 BMP15O95972 392 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DCNP07585 359 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RHOP08100 348 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CPB1P15086 417 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PLCG1P19174 1290 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MARCKSP29966 332 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TNFSF9P41273 254 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GPC5P78333 572 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GRIN1Q05586 938 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MCL1Q07820 350 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MCM6Q14566 821 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ANGPT1Q15389 498 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZNF280DQ6N043 979 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CCDC105Q8IYK2 499 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DTWD2Q8NBA8 298 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MCRS1Q96EZ8 462 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CORO1BQ9BR76 489 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HAPLN2Q9GZV7 340 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PARVGQ9HBI0 331 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FBXL5Q9UKA1 691 aa10.04□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DMDP11532 3685 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TRAK2O60296 914 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CLTAP09496 248 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ATF2P15336 505 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LONP1P36776 959 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GUCY2FP51841 1108 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ADCY1Q08828 1119 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SNW1Q13573 536 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZBTB41Q5SVQ8 909 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ELMOD1Q8N336 334 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 APPL2Q8NEU8 664 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LRRC15Q8TF66 581 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RAD54LQ92698 747 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MSTO1Q9BUK6 570 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RPF1Q9H9Y2 349 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TBX20Q9UMR3 447 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SIT1Q9Y3P8 196 aa10.03□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms